Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0428 ATGCTTAGGAATTTTGCCGTGAGGATACAGAAGGGTCTTTCACTGTTTGTAGCTAGAAGGCATGCATCATTCAGCTACTTCAGCGAAGATCGTGGCACCGCCGCAACCGATGATCATGTTATGGAAGGCTATTTTGCTGTTCTTGCAATCAAGGGTGAGGAAAAAAAGAGGTTTGTTGTTGGCTTAGACTACTTGAATGATCCTGCTTTCATGAGACTTCTGGACCAAGCTCGTGAAGAGTATGGCTTCAGACAGAAGGGTGCTCTTGCACTCCCTTGTCGCCCTCATGAGTTACAGAAGATTCTAGATGGCCCCAAAGCATAG 324 0.463 MLRNFAVRIQKGLSLFVARRHASFSYFSEDRGTAATDDHVMEGYFAVLAIKGEEKKRFVVGLDYLNDPAFMRLLDQAREEYGFRQKGALALPCRPHELQKILDGPKA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0428 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 106 - -
Aed8g0428 107 Pfam Auxin responsive protein 21 102 IPR003676 GO:0009733
Aed8g0428 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0428 Aed-Chr8 3557591 3557914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0428 32 93 Calmodulin-binding Proteins AT4G34750 45.312 3.29e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0428 - K14488 gmx:100818734 172.94