Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0427 ATGCTTAGGTATTTTGTTGGGAGGATACAAAAGGGTCTCTCAGTACTTTTTGTACCAAGTAGAAGGAATGCACCATTCAGCTACTTCAGTGAAGATGATCATGCCGCCACAACTGATGATGATGATGATGTTATGGAAGGCTATTTTGCTGTTCTTGCAATAAAGGGTGAAGAAACAAAGAGGTTTGTTGTTGGGTTAGATTACTTGTCTGATCCTGCATTCTTGGAATTGTTGGACCAAGCTCGTGAAGAGTATGGTTTCAAACAGCAAGGAGCTCTTGCACTCCCTTGTCTCCCTCAAGAGTTACAAAAGATTCTAGATGCTCCAAAAGCATAG 336 0.4137 MLRYFVGRIQKGLSVLFVPSRRNAPFSYFSEDDHAATTDDDDDVMEGYFAVLAIKGEETKRFVVGLDYLSDPAFLELLDQAREEYGFKQQGALALPCLPQELQKILDAPKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0427 111 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
Aed8g0427 111 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 110 - -
Aed8g0427 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0427 Aed-Chr8 3555185 3555520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0427 29 97 Calmodulin-binding Proteins AT4G34750 39.437 1.02e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0427 - K14488 gmx:100797479 152.91