Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0421 ATGTCACAGAATTCTGAGGAGATAAACAGCACAGTCGAGCAGTGGAAATGGTCTGAAATGCAGGGCCTTGAGCTTGTGGCTTCTTCTGCTCCTGTTTCTGAGTCACATGAATCCAACAACTCAACATTAATGGAAGAGAAAAGAGAAGGGAGGGTGGTAATGGAGGAGGAGGCTTCAGGGGCAAAGAAAGAAAGTGTTCTTAAGAAGGGTGAGAGTGTTGCTTCTGTTGGGTTTGGGGAGCTTTTTAGATTTGCTGATGGGTTGGATTACACTCTAATGGCAGTTGGAAGTGTTGGAGCATTTGTACATGGCTGCTCCTTGCCACTCTTTCTTCGGTTCTTTGCTGATCTTGTGAATTCCTTTGGTTCCAATGCGAATGACTTGGACAAGATGACTCAGGAAGTGGTCAAGTATGCGTTTTACTTCCTTGTGGTGGGGGCTGCAATATGGGCATCCTCGTGGGCAGGTGAACGGCAATCAACGAGGATGCGGATCAGGTACCTTGAGGCAGCGTTGGACCAGGACATTCAATTCTTTGACACCGAGGTTCGAACATCCGATGTTTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGCTTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCACTGGTTACCCTCGCTGTGGTCCCAATAATAGCAGTGATTGGAGGCATTTACACCACCACTTTGGCCAAGCTATCTAGTAAAAGCCAGGAAGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACTGTTGTTCAAATTCGAGTGGTGTTGGCCTTTGTTGGGGAGACAAGAGCACTGCAGGGCTATTCATCTGCACTGAGGATTGCTCAGAAGATTGGGTACAGGACTGGATTTGCAAAGGGAATAGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGAGGCTATTTGGTGAGGCACCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTTCTGTTATGATTGGCGGATTGTGA 1029 0.4674 MSQNSEEINSTVEQWKWSEMQGLELVASSAPVSESHESNNSTLMEEKREGRVVMEEEASGAKKESVLKKGESVASVGFGELFRFADGLDYTLMAVGSVGAFVHGCSLPLFLRFFADLVNSFGSNANDLDKMTQEVVKYAFYFLVVGAAIWASSWAGERQSTRMRIRYLEAALDQDIQFFDTEVRTSDVLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIYTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQGYSSALRIAQKIGYRTGFAKGIGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0421 342 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 93 341 - -
Aed8g0421 342 Gene3D ABC transporter type 1, transmembrane domain 88 342 IPR036640 GO:0005524|GO:0016021
Aed8g0421 342 SUPERFAMILY ABC transporter transmembrane region 81 338 IPR036640 GO:0005524|GO:0016021
Aed8g0421 342 Pfam ABC transporter transmembrane region 186 340 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0421 342 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 94 342 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed8g0421 342 MobiDBLite consensus disorder prediction 28 52 - -
Aed8g0421 342 CDD ABC_6TM_Pgp_ABCB1_D1_like 93 342 - -
Aed8g0421 342 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 93 341 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0421 Aed-Chr8 3485982 3493712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0421 68 342 Calmodulin-binding Proteins AT2G36910 78.405 9.00e-162 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0421 K05658 - gmx:100777382 576.63