Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0415 ATGCCAAAGCAAGGCACTCTGTTCTTCAAAGTGAAGAAACTGGACACGTGTCAAAATCTGGAGCATTTCATTAATCCAACGGTCCAAATGCCAGAAAGGAAGGGTAACATTACACACCTTATCTTTCATTCACACTCTCACTCACTCTCAGTCTCAATTTTTGTTCAACACTCTCAGAGTCCTCTTCTGCTCCCACGCATATGCATACCGCACAACCACCACCCTTCGAGTAAAATGGAAATCACGAGCAGTCATAGCAGCAGCGGCAGCATCATGTGGTTTTTCAAAGATAAGGGCTTTGATGACAACAGTGTGCAAGGAATGTTCAGAAAGTGCAAGCGTCTCGAGGGTGTGCATCAAGAAAGAGCAAATGAGAATTGGGACTATTTGAAAAGCATTGGCATTGAAGAAAGGAAACTTCCCTCAATTGTTTCAAAATGCCCCAAAATCCTTGCACTGGATCTATATGAAAAGATTGTTCCCACTGTTGAGTGTCTCAGGACATTAGGAACAAAACCCCGCGAGGTTGCTTCTGCCATAGCAAAGTTCCCTCACATACTCTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCATTCTTTCAGACACTGGGTATCCCCGAAAAGCACATTGGCAAGATGATTCTGCTCAACCCTAGGCTCATCAGCTACAGCATTGAAACAAAGCTGACAGAAATCGTCAACTTCCTTTCCGGCATTGGTCTAAATAAGGATGGAATGATCGGGAAAGTTATCGTTAGGGACCCATATATCATGGGCTATAGTGTCAATAAGAGGCTCCGCCCTACTTCGGAGTTTTTTAAGTCAATAGGGCTGAGTGAGGCCGATCTTCAAGCTGTGGCTTTGAACTTCCCATCAATCTTGAGTCGAGATGTGAACAAGCTTCTGGTACCTAATTACGCGTATCTAAAGAACCGCGGATTTGAAGACAGGCAGATAGTTGCTTTGGTGGTTGGTTTTCCTCCTATCCTGATCAAGAGCATCCACAATTCGTTAGAGCCAAGGATCAAGTTTTTAGTGGATGTGATGGGGAGACAGGTGGATGAAGTTGTTGATTATCCTTGCTTCTTTCGTCATGGCCTGAAGAGAAGAATAGAGCCGCGGCACAAGCTTCTAAAAGGGAGGAGTTTAGATTGTAGCTTGAGTGAAATGTTGGACTGTAATAGGAAGAAGTTCTTCATGAAGTTTGGCTTGTTAGAAGAACTTGCCTTGAGTAACTAG 1245 0.4402 MPKQGTLFFKVKKLDTCQNLEHFINPTVQMPERKGNITHLIFHSHSHSLSVSIFVQHSQSPLLLPRICIPHNHHPSSKMEITSSHSSSGSIMWFFKDKGFDDNSVQGMFRKCKRLEGVHQERANENWDYLKSIGIEERKLPSIVSKCPKILALDLYEKIVPTVECLRTLGTKPREVASAIAKFPHILSNSVEEKLCPLLAFFQTLGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLSGIGLNKDGMIGKVIVRDPYIMGYSVNKRLRPTSEFFKSIGLSEADLQAVALNFPSILSRDVNKLLVPNYAYLKNRGFEDRQIVALVVGFPPILIKSIHNSLEPRIKFLVDVMGRQVDEVVDYPCFFRHGLKRRIEPRHKLLKGRSLDCSLSEMLDCNRKKFFMKFGLLEELALSN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0415 414 Pfam mTERF 192 400 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 Pfam mTERF 86 246 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 355 386 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 213 244 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 322 354 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 250 281 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 SMART mt_12 106 136 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 Gene3D Transcription termination factor 3, mitochondrial 183 409 IPR038538 -
Aed8g0415 414 PANTHER CGI-12 PROTEIN-RELATED 90 407 IPR003690 GO:0003690|GO:0006355
Aed8g0415 414 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 90 407 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed8g0415 mTERF 1.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0415 K15032 - gmx:100816929 616.69