Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0410 ATGGTTGCTGATACATCAAGATCTGTGAGATTTCAAGATGAACTTGAGACAAATAAGTTAATGGACAACAAAGAGAGTCACTTGCGGATGGTGTCCTTTGATGAAGTGAGTGATGAACAGAAGAAGAGTGAGAAAGATGCAAATGCAATAAGCAAGTCCTTCTCTGATGGAAGAGAACTTTCAAGGGTTTTAGGATCCTCTTGGTATCTGTTATCAATTGAACGTCAGAATGAATGTTGGAAGAAAGTTTGTTCACTGCAATACCCACACTGCCAGTATCGTTATCTTGATTGTCAAAGCATGGATGACCCAAATAGGGTTGCTTGGTTAAGATCAAGCAATCTCTCAAGTCTATGTGATCAGAGCAGTGATTTCTTTCAATTTGGCATTTTTGCTGATGCTCTCAATTTGGAAGTTACTGCCTCAAAATTCTTCAACAAATACTATTACTGTCTCTGGTGGGGACTAAGGAATCTAAGCTCGGTGGGACAGAATCTCTTAACTGGCACACGTGTTGCAGAGATCAATTTTGCTGTGATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTGCTTATAGGCAATATGCAAACCTACCTGCAATCCACGACTACACGGCTAGAAGAATGGAGAATAAGAAGGACTGATACAGAAAGATGGATGCGTCACAGGCAGCTCCCTCGTTACCTGAAGCAAAATGTGCGACGTCACGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAGGAAACTATTCTCAGAGACCTTCCCATAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTTAATCTAGTCCGACAAGTACCACTATTTGATCAAATGGATGAAAGGATGCTAGATGCAATATGTGAAAGGTTGAAGCCTTCTCTTTTCACTCCCGGTGCCTTCGTGGTTCGCGAAGGCGACCTTGTGAATGAGATGCTTTTCATTGTCCGAGGACGCCTAGACTCTTGCACCACTAACGGTGGCCGGACAGGTTTCTTCAACACAAGCAGGCTTGGCTCAGGTGACTTCTGTGGCGAAGAGCTCTTGCCATGGGCCTTGGACCCTCGTCCGACGGTCGTGCTTCCCTCGTCAACTCGGACGGTGAAAGCCATCACTGAAGTGGAAGCCTTTGCACTCATAGCAGGGGACTTGAAGTTTGTGGCAGCACAATTCAGAAGGTTGCATAGCAAACAATTGAGGTACACTTTCAGGTTCCACTCACATCAGTGGAGGACTTGGGCTGCATGCTTCATACAAGCAGCATGGTTCAGGTACAAGAGAATGAAGGAGACAAGTGAGCTCAAGAGAATGGAGAATATGATGATGGCATTTGTGCCTGGAACAACTTGCAGTGAACATTTCTCTGCACCCCTTCAGGCCCCAAAAAAGGGAACAATGCATGCTGCAAAACTAGCTTCAAGCCCAAGGAGAGGTAGTAGGAGCCTGAGATATGGGCCTGAACTTGACATTCTTGGTTCATTGAGGAAGCCCCTTGAACCAGACTTTACGAATGACGACAACGATGTTGGTGACTTTTGA 1551 0.4513 MVADTSRSVRFQDELETNKLMDNKESHLRMVSFDEVSDEQKKSEKDANAISKSFSDGRELSRVLGSSWYLLSIERQNECWKKVCSLQYPHCQYRYLDCQSMDDPNRVAWLRSSNLSSLCDQSSDFFQFGIFADALNLEVTASKFFNKYYYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMRHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPIDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGAFVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNTSRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAGDLKFVAAQFRRLHSKQLRYTFRFHSHQWRTWAACFIQAAWFRYKRMKETSELKRMENMMMAFVPGTTCSEHFSAPLQAPKKGTMHAAKLASSPRRGSRSLRYGPELDILGSLRKPLEPDFTNDDNDVGDF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0410 516 ProSiteProfiles cAMP/cGMP binding motif profile. 279 364 IPR000595 -
Aed8g0410 516 SUPERFAMILY Voltage-gated potassium channels 142 242 - -
Aed8g0410 516 CDD CAP_ED 279 410 IPR000595 -
Aed8g0410 516 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 61 508 - -
Aed8g0410 516 Gene3D Jelly Rolls 277 397 IPR014710 -
Aed8g0410 516 PANTHER PROTEIN CNGC15A 61 508 - -
Aed8g0410 516 SUPERFAMILY cAMP-binding domain-like 208 401 IPR018490 -
Aed8g0410 516 Gene3D - 120 203 - -
Aed8g0410 516 SMART cnmp_10 279 410 IPR000595 -
Aed8g0410 516 Pfam Ion transport protein 63 206 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed8g0410 516 Gene3D Helix hairpin bin 205 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0410 Aed-Chr8 3406603 3411449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0410 61 509 Ion Channels AT2G28260 62.806 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0410 K05391 - gmx:100815543 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0410 8 3406603 3411449 Aed8g0410 8 3406603 3411449 ECH