Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0399 ATGTTCCTCTGCGGTAACGCGCACGGCTTCGGCGCAATGGGACCAATCTCCGCCTCCTTCGGAAAAGACGAGGTTTTCTGCGCCATCGATGCTAGTGGGAAGCAGGACGTTATTTTCTGGGGGAACAACGCCACGTCACCGTCGGTTTCCACCGTCGCCAGCGCCGTCCCTGCCATGTCAGCACTCTCCGGCGGGGAAGGCTTTCTCTGCGGCATTTTGGCGAACACCTCGCAAGCCTTTTGCTGGAGCGCTGTAACCAAACCGAGCGCAGATCTAATTCTCGTGCCTCCGCCGTACCGGAACACTGCCTACTCACACATCGCCGCCGGAAAGAGCCATGTGTGCGCCGTCCGGGGATCCTACTATGCTGATCGCGATTCCGGCAACGTTGATTGCTGGGAAATCACAAAAACCGCCAACAAAACTTTGTCAGCGAAACAGAGTGACTCGTTCAACGACCAGTCCGTGATGAATCGGGAGTTAAAGAGGGTTGTTTCCGGCGACGGGTTCACCTGCGGCGAGGTTGACGGAGGTGGACTAATCTGCTGGGGACCCACTTCGGCGAGTTTAGGAAACATTTCCAACGTTTCAGACACTTTCGCGGTTCTGGCGGCGGGTCGGAGCGCCGTGTGCGGCGTTTTCAACGTCTCCGGCGAGTTAAAATGCTGGGGCGACCCGGTTTCGTTTTCGGATCCTCCACTCGATTCGGTTCGATTGGTGTCTCTATCCGCAGGGGCTAACCATTTCTGCGGCGTGAGAATGGATAACCACGAAGTTGAATGTTGGGGTGATTTGAATTCCTCGGTGATTCCAAAAGGTAACGGCTTTATGGCCATTGCTTCCTCCGATTTCACCACGTGCGGGATCAGGGAAGATGATCTTCTTCTTGATTGTTGGTTGGTCAACGCTTCAAAACCCGATTTTGACCCTCCTATGGAGCTCTCGAGCCCTGGACTCTGCAGGGCTAGTTCGTGTGGAGTTGATGAGTTTGCTTTCAATGCTAGTGTTCTCAACGAGTTAGCTTTGACAAGCTTGTGTGTTAAAGAGGATTTGAGGATTTGTTCGCCTTGTGGCTCAAACTGTTCCAAAGGGTTCTTCTTGTCTAGTGAATGTACAATGAACTCTGATAGAGTTTGCACTGCTTGTTCTCTCTGTCAGAACAGTTCTTGTTTTGGTGTTTGTGGACTCCACTCCTCAACGGGGCTGCATTTGCATTGGCATTGGCATCATTTGCAAAAATGGTTGGTTATAGTTGGGTGTCCTGTGTTGGGGTTTTTGGTTATTTTGCTTTGTGGGTGTCTTTTTATGATTAGAAAAAGGACTAAGAAGCAATCCAAGTCTTGCATGAGAAAACCGGATCAGGAGGATGATCATGTGAATGTTGCTCTTAACTCCACTCCTTCTGTTAATTCCTGCCCTGGCGCGCCTCAGGTTTTCAGGCTTTCTGAGCTGAAGGATGCTACTAATGGGTTTAAGGAGTTCAATGAACTTGGGAGAGGAAGTTACGGGTTTGTGTACAAAGCAGCATTAGCTGATGGGAGAGTGGTGGCTGTCAAAAGAGCAAATGCAGCCACCATAATTCACACCAACAACCGCGATTTTGAAACGGAGCTGGAAATCCTCTGCAAAATCCGCCACTGCAATGTAGTAAACTTGCTGGGGTATTGCACGGAGATGGGGGAGAGGCTGCTTGTCTACGAGTACATGCCTCACGGGACTCTCTACGATCACCTCCACGGTGGTCTTTCTCCGCTTAATTGGAGCCTCAGGTTGAAGATAGCAATGCAGGCTGCAAAGGGGCTCGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCACAAGGATCTCAAAAGTTCAAACATCCTCTTGGATTCAGAGTGGGGAGCAAGGATTTCCGATTTCGGACTCCTTGCTTCGAGTGATAAGGATCTCAATGGGGACCTAGAAAGCGATGTTTACAATTTCGGGATTGTGTTGCTTGAGATTCTGAGTGGAAGAAAGGCTTATGATAGGGATTACACTCCACCAAACATGGTTGAATGGACAGTGCCTTTGATCAAACAAGGGAAAGCTGCTGCTATAATTGATAGGTATGTGGCTCTTCCAAGAAATGTTGAACCTTTGCTCAAGCTTGCTGATATAGCAGAGCTTGCAGTGAGAGAGAATCCAAGTGAGCGACCACATATGTCAGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGAAGGATTGATCTTACAGCATTAG 2250 0.4947 MFLCGNAHGFGAMGPISASFGKDEVFCAIDASGKQDVIFWGNNATSPSVSTVASAVPAMSALSGGEGFLCGILANTSQAFCWSAVTKPSADLILVPPPYRNTAYSHIAAGKSHVCAVRGSYYADRDSGNVDCWEITKTANKTLSAKQSDSFNDQSVMNRELKRVVSGDGFTCGEVDGGGLICWGPTSASLGNISNVSDTFAVLAAGRSAVCGVFNVSGELKCWGDPVSFSDPPLDSVRLVSLSAGANHFCGVRMDNHEVECWGDLNSSVIPKGNGFMAIASSDFTTCGIREDDLLLDCWLVNASKPDFDPPMELSSPGLCRASSCGVDEFAFNASVLNELALTSLCVKEDLRICSPCGSNCSKGFFLSSECTMNSDRVCTACSLCQNSSCFGVCGLHSSTGLHLHWHWHHLQKWLVIVGCPVLGFLVILLCGCLFMIRKRTKKQSKSCMRKPDQEDDHVNVALNSTPSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFETELEILCKIRHCNVVNLLGYCTEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYNFGIVLLEILSGRKAYDRDYTPPNMVEWTVPLIKQGKAAAIIDRYVALPRNVEPLLKLADIAELAVRENPSERPHMSDIASWLEQIVKEGLILQH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0399 749 Pfam Protein tyrosine and serine/threonine kinase 495 641 IPR001245 GO:0004672|GO:0006468
Aed8g0399 749 Gene3D Phosphorylase Kinase; domain 1 455 568 - -
Aed8g0399 749 SMART serkin_6 491 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0399 749 ProSiteProfiles Protein kinase domain profile. 491 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0399 749 SUPERFAMILY RCC1/BLIP-II 21 266 IPR009091 -
Aed8g0399 749 SUPERFAMILY Protein kinase-like (PK-like) 467 738 IPR011009 -
Aed8g0399 749 PANTHER OS01G0750732 PROTEIN 13 745 - -
Aed8g0399 749 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 13 745 - -
Aed8g0399 749 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 324 379 IPR001368 GO:0005515
Aed8g0399 749 Gene3D - 16 305 IPR009091 -
Aed8g0399 749 Gene3D Transferase(Phosphotransferase) domain 1 646 745 - -
Aed8g0399 749 Gene3D Transferase(Phosphotransferase) domain 1 569 645 - -
Aed8g0399 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Aed8g0399 749 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0399 Aed-Chr8 3323752 3326001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0399 7 743 Receptor kinase-like Gene Family AT3G59420 31.026 5.96e-106 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed8g0399 PK_Tyr_Ser-Thr 4.9e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0399 - - gmx:100802259 1407.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0399 8 3323752 3326001 Aed8g0399 8 3323752 3326001 ECH