Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0398 ATGCCATTACCGTGTATTCTCTGTTTACTGAAACATGGTCTTTCTCTTTTTCTCCACAACACGCTCTCCCTCTCCCTCTCCCAAAACCTTCTTATATACCCCGAAACACCAATATCCCAGGGAGTTTTACGCACTTATTCATTATCCCAACAAGACATGAAGTTTCCTTCTTTCGCTTGTTTCACTTGTTTCTCTCCATCCACCACTCGACAAAACAACAACAACAACAACAACGACTACCCAGAAGAAGAGATCAACGATGGTAGCTTTCGTTTGTTCACTTACAACCAATTGAAATCAGCCACGCGCAATTTCCATTCCTCGGAGAAGGTTGGAGAAGGTGGCTTTGGATCTGTCTACAAGGTTGGTTATTTATTATATTATATACACATTCTCTATTCTCATTCTTTTAATGAGTTTGGGAAGCTTGTGGATGGTTCTTTTGTGGCGGTGAAAGTGCTTTCGGTTGAGGTGGAATCCATGCGAGGAGAGAGGGAGTTTGTGGCGGAATTGGCCACACTTGCAAACATCAAACACCAAAACCTTGTAAGCCTAAAAGGGTGTTGTGTCGAAGGTGTTCACAGATATTTGGTCTATGATTACATGGAGAACAATAGCCTCTACCACACTTTCTTAGATGTTTTTGCAACTTTTCAGGCTTGGGCAGCGTATCAATCTAACGATTTATCAAAACTGGTGGATCCCATGCTTAACATGAATTTCCCCGAGGAAGAGGCCTTGAAATTTCTCAAGGTGGGGCTGCTTTGCGTGCAAGAAACCGCAAAGCTAAGGCCACGAATGTCAGAGGTTGTGGAGAAGTTGACCAAGGACAATGTTGACATGAGAGACGTTCACATTTCGAAACCAGGCTTCGTTGCTGATCTTAGGAACATCAGAATCAAGACACAAAACCTTAACTCGTCCCAGGAATCAAGCTCTTCTGCCGGAGCAACCTTTACAAGCTCCATTTGGGGTTCCGTCAATCTTGCTCGTTAG 996 0.4357 MPLPCILCLLKHGLSLFLHNTLSLSLSQNLLIYPETPISQGVLRTYSLSQQDMKFPSFACFTCFSPSTTRQNNNNNNNDYPEEEINDGSFRLFTYNQLKSATRNFHSSEKVGEGGFGSVYKVGYLLYYIHILYSHSFNEFGKLVDGSFVAVKVLSVEVESMRGEREFVAELATLANIKHQNLVSLKGCCVEGVHRYLVYDYMENNSLYHTFLDVFATFQAWAAYQSNDLSKLVDPMLNMNFPEEEALKFLKVGLLCVQETAKLRPRMSEVVEKLTKDNVDMRDVHISKPGFVADLRNIRIKTQNLNSSQESSSSAGATFTSSIWGSVNLAR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0398 331 SUPERFAMILY Protein kinase-like (PK-like) 80 215 IPR011009 -
Aed8g0398 331 PANTHER RECEPTOR-LIKE KINASE 216 303 - -
Aed8g0398 331 PANTHER RECEPTOR-LIKE KINASE 60 214 - -
Aed8g0398 331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 216 303 - -
Aed8g0398 331 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 60 214 - -
Aed8g0398 331 SMART tyrkin_6 105 274 IPR020635 GO:0004713|GO:0006468
Aed8g0398 331 ProSiteProfiles Protein kinase domain profile. 105 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0398 331 Pfam Protein tyrosine and serine/threonine kinase 107 209 IPR001245 GO:0004672|GO:0006468
Aed8g0398 331 Gene3D Phosphorylase Kinase; domain 1 65 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0398 Aed-Chr8 3299839 3302148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0398 220 291 Receptor kinase-like Gene Family AT1G07650 37.500 1.40e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aed8g0398 PK_Tyr_Ser-Thr 6.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0398 - - gmx:100813945 229.18