Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0392 ATGAGCGTCATCGACATTCTAACCAGAGTCGATTCCATTTGCAAGAAGTACGACAAATACGACGTCGATAAGCACCGCGATGCCAATGTCTCCGGCGACGATGCCTTTGCCAAACTCTACGCCGACGTCAACGCCGACATCGAGGCCTTGCTTCAGAAAGCGGAAACTGCTTCGAAGGACAAAGGTAAGGCATCTGCTGTAGCGATCAATGCGGAGATTCGTCGTACTAAGGCTCGCTTGCTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTGTGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCAGATAGAATCCAAGATATCCCAGATGGGGCTCCTCCTGTGCCAAAACAAACTGGAGGATGGGCAGCTTCTGCGTCACGTGCTGAAATTAAGTTTGATTCAGATGGGCGATTTGATGATGAATACTTCCAACAGTCTGAACAATCAAGTCAATTTAGGCAGGAGTATGAAATGCGTAGAATGAAACAGGCAAGTTTGGATATGATTGCTGAAGGATTGGATACATTGAAAGACATGGCACATGATATGAATGAGGAAATGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACAAATGTTAGACTTAAACACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTATTGTTGATTATAATTTTGGGAATTGCTGCCTACTTATACAACGTACTAAAGAAATGA 795 0.4415 MSVIDILTRVDSICKKYDKYDVDKHRDANVSGDDAFAKLYADVNADIEALLQKAETASKDKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQDIPDGAPPVPKQTGGWAASASRAEIKFDSDGRFDDEYFQQSEQSSQFRQEYEMRRMKQASLDMIAEGLDTLKDMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0392 264 CDD SNARE_Qc 179 230 - -
Aed8g0392 264 SMART tSNARE_6 164 231 IPR000727 -
Aed8g0392 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 169 231 IPR000727 -
Aed8g0392 264 Pfam SNARE domain 206 255 IPR000727 -
Aed8g0392 264 SUPERFAMILY SNARE fusion complex 174 229 - -
Aed8g0392 264 Gene3D - 177 240 - -
Aed8g0392 264 PANTHER SYNTAXIN 1 260 IPR045242 -
Aed8g0392 264 Coils Coil 40 60 - -
Aed8g0392 264 PANTHER SYNTAXIN-73 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0392 Aed-Chr8 3220783 3224381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0392 1 263 SNARE and Associated Proteins AT3G09740 75.940 1.53e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0392 K08506 - gmx:100819272 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0392 8 3220783 3224381 Aed8g0392 8 3220783 3224381 ECH