Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0390 ATGGCTTCCCAATGCCCAGCGGAGGAAGAAAACTCAAAGCGACATTGGTCCCTCGAAGACTTCGAGATCGGTAAACCTCTCGGTAGGGGCAAATTCGGCAGAGTTTACGTCGCCAGAGAAGTCAAGAGCAAATTTGTGGTGGCATTGAAGGTTATATTCAAGGAACAAATTGACAAGTACAGAATTCATCATCAACTTCGGAGAGAGATGGAGATACAGACGAGTCTCCGGCACTCGAACATCCTACGTCTTTATGGCTGGTTCCATGATGCTGACCGTGTTTTCTTAATTCTTGACCTCACAAAGGCATTGGCTTATTGTCATGAGAATCATGTTATTCATAGGGATATCAAGCCAGAAAATTTGTTGCTTGACCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTTCAGTCTAGAAGCAAAAGACACACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTTGAAAACAAAGCTCATGACTATGCAGTTGATAACTGGACTCTCGGCATCCTTTGTTATGAGTTCCTCTACGGCGCTCCTCCGTTTGAGGCCGAGAGTCAAGCTGATACATTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCACCCCTTCTGTTTCTATGGAAGCCAAAAATCTGATTACTCGGCTCCTGGTGAAAGACTCCTCACGAAGGCTCTCACTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATACAAATTGTATGGATATTTGCAACTAG 768 0.4375 MASQCPAEEENSKRHWSLEDFEIGKPLGRGKFGRVYVAREVKSKFVVALKVIFKEQIDKYRIHHQLRREMEIQTSLRHSNILRLYGWFHDADRVFLILDLTKALAYCHENHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQADTFKRIMKVDLSFPSTPSVSMEAKNLITRLLVKDSSRRLSLQKIMEHPWIIKNTNCMDICN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0390 255 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 97 251 IPR030616 GO:0004672
Aed8g0390 255 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 9 99 IPR030616 GO:0004672
Aed8g0390 255 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Aed8g0390 255 SMART serkin_6 21 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0390 255 ProSiteProfiles Protein kinase domain profile. 21 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0390 255 CDD STKc_Aurora 20 244 - -
Aed8g0390 255 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Aed8g0390 255 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Aed8g0390 255 PIRSF ILK 1 97 - -
Aed8g0390 255 PIRSF ILK 86 249 - -
Aed8g0390 255 Pfam Protein kinase domain 97 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0390 255 SUPERFAMILY Protein kinase-like (PK-like) 14 249 IPR011009 -
Aed8g0390 255 Gene3D Transferase(Phosphotransferase) domain 1 101 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0390 Aed-Chr8 3201720 3204407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0390 8 250 CBL-interacting serine-threonine protein kinases AT5G25110 34.783 2.75e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Aed8g0390 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0390 K08850 - gmx:100800111 483.026