Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0388 ATGGCCGACGACTTCGAATTCTCCGACAAAGTCCCTCCTTCCTTCGATCGAGTGGGTTCAAAAGGGTTCAACCCAGGATTAGTTGTTCTCCTGCTTGTTGGTGGGTTGCTGTTGATATTCCTGATTGGAAACTATGTACTCTACTCATATGCACAGAAGACCCTCCCTCCTAGAAAAAGGAAGCCAGTCTCAAAGAAGAAGATGAAAAAGGAAAGAATGAAGCAGGGTGTCTCTGCACCTGGAGAGTAA 249 0.4618 MADDFEFSDKVPPSFDRVGSKGFNPGLVVLLLVGGLLLIFLIGNYVLYSYAQKTLPPRKRKPVSKKKMKKERMKQGVSAPGE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0388 82 PANTHER DNA-BINDING PROTEIN S1FA2 3 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Aed8g0388 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Aed8g0388 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 82 - -
Aed8g0388 82 MobiDBLite consensus disorder prediction 55 82 - -
Aed8g0388 82 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0388 Aed-Chr8 3190646 3192667 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Aed8g0388 S1FA 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0388 - - gmx:100500343 123.25