Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0381 ATGGGGAGGAAAGGAAATTGGTTTTCTTCTGTGAAGAAAGCTCTAAGCCCTGAGCCAAAGGAGAAGAACGATCAGAAATCAAGTAGATCAAAGAAGAAATGGTTTGGGAAACGAAAATTGCAGACTTCAGAATCACCCTCAGAAACTGATAATGCACCTCCTCCTCTTCCTCCACCTGAGGCTGAGATTATTTTAACTCATGTTGAGAGTGAAACCAGCCATGATCATGTCGAAATTGCAACTGCAGTGGATGCTGTGGAACCTGTTCCTGCTGTTCAGACAACAGTTGCTGAGGTTCAAGCCACTCCAATTGTTCAGTTTAACAGAAAACCATCAGAAGAAGTGGCAGCAATCAGGATTCAAAAAGCTTTCAGGGGATACTTGGCAAGAAGAGCGTTGCGAGCGTTAAGGGGGCTGGTGAGGTTGAGATCACTGATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAGACTTTTGCTCATTTGCAAACTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAATCAAGCCCTACAGAAACAGCTCTTACAGAAGCATGCAAAAGAGCTAGAGAGCATGAGGATTGAGGAGGAATGGGATGACAGCATACAATCAAAAGAACAAGTTGAAGCCAAGCTACTGAGCAAATATGAGGCTGCTATGAAAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACTGGAAGAATTCATCAAGATCTATAAATCCAATGTTCATGGATCCAACCAATCCAGCCTGGGGTTGGAGTTGGTTGGAACGATGGACGGCAAGCCGGCCTAGTGAGAGCCATAGCCAGATGATAGAGAAAGAGAAGAATGACAACAAATCTGTGAGAAGTTCCAGCCGTGGCATTACTAGTGCCGAAATCAGCAAAGCATTTGCCAAGTTTCAGCTCAATTCTGAGAAGCATTCTCCAACAGCCAGCCCAAATCCAGGCTCACCTAACTTTGAGTCCCAATCCCAATCCTATTCAAATCCTCCCAAGCCACCTTCTCCAGCAGTTGCCAAGAAAGTTAAGAAAGCAAGTCCGAAGGAGATATTTGCTATGGATGATGACACCAAGAGCATGGTGAGTGTGCAGTCGCGGAGGAGACACTCGATTGCTGGATCAATAGTGGGAGATGGTGATGATGAAAGCCTTGCAAGCTCTCCATCTATTATTCCAAGTTACATGGTGCCAACTAAATCTGCCAAAGCCAAGTCAAGGATGCAAAGTCCATTAGCTGCTGCAGAAAATGGAACACCATTTGATAAAGGGACTGCTGCAAAGAAACGTCTTTCTTTCCCTGCTTCACCTTCTAGGCCAACAAGGAGACATTCAGGTCCACCAAAGGTAGAAAGCACCTTCAATGCTGTTGTGGGAAATGGTGTCGCTGCTTGA 1434 0.454 MGRKGNWFSSVKKALSPEPKEKNDQKSSRSKKKWFGKRKLQTSESPSETDNAPPPLPPPEAEIILTHVESETSHDHVEIATAVDAVEPVPAVQTTVAEVQATPIVQFNRKPSEEVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLQKHAKELESMRIEEEWDDSIQSKEQVEAKLLSKYEAAMKRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPAWGWSWLERWTASRPSESHSQMIEKEKNDNKSVRSSSRGITSAEISKAFAKFQLNSEKHSPTASPNPGSPNFESQSQSYSNPPKPPSPAVAKKVKKASPKEIFAMDDDTKSMVSVQSRRRHSIAGSIVGDGDDESLASSPSIIPSYMVPTKSAKAKSRMQSPLAAAENGTPFDKGTAAKKRLSFPASPSRPTRRHSGPPKVESTFNAVVGNGVAA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0381 477 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 414 477 - -
Aed8g0381 477 Gene3D iswi atpase 109 147 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 318 342 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 386 405 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 318 381 - -
Aed8g0381 477 SMART iq_5 112 134 IPR000048 GO:0005515
Aed8g0381 477 MobiDBLite consensus disorder prediction 15 30 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 1 59 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 281 295 - -
Aed8g0381 477 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 472 - -
Aed8g0381 477 MobiDBLite consensus disorder prediction 356 377 - -
Aed8g0381 477 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Aed8g0381 477 MobiDBLite consensus disorder prediction 277 301 - -
Aed8g0381 477 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0381 Aed-Chr8 3146615 3151031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0381 1 477 IQD Protein Family AT5G03040 50.304 1.84e-132 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0381 - - gmx:100801847 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0381 8 3146615 3151031 Aed8g0381 8 3146615 3151031 ECH
Aed2g1823 2 23028212 23032155 Aed8g0381 8 3146615 3151031 PCT