LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed8g0372	ATGGAGAATAGGGTATCCTCCTCTTTCTTCTTCTTCTTCCTCTTCTTGTCCTCTTACTCACTCTTGCGACTTTCTTCTGCTCAGATGCCAGGTTTTGTAAGTATAGATTGTGGTGGTAAACGAAAATTTACAGATGAAATTGGCATTAAATGGACCCCTGATGATAAAATTAGGTATGGAGAAATAAGCACTATATCTGTTGACAATGAGAGACGGAAGCAGTACACAACACTCAGACATTTTCCTGCTGATTCTAGAAAATATTGCTATACGCTTAATGTTATTAGTAGGACAAGGTACCTACTAAGAGCATCATTCTTGTATGGGAACTTTGATGCAAACAATGTTTATCCAAAATTTGACATTTTTATTGGTGCTACTCATTGGTCAACTATAGTTATATCTGATGCTAACACAATAGAAACGAGAGAGCTTATATTTTTGGCTCTAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTTCGCTTGAACTCCGGCAGTTCAATGGTTCAGTTTATTATACATACACTGAGGAACACTTTTACCTTAGTGTCTCTGCAAGGATCAATTTTGGTGCAGGCAGTGATGCCCCTATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAGAGCAAATTATCTTGTTGATGAGAAGTTATATCTAGTGTACTTTCACACTACTCCTCAGCAGATTGGGCACAAGAAGGGGGTGACCCTTGTTTACCTGTTCCATGGTCATGGTTTGTTGTCTAGTAAAAATTTGACAGGCAATATTCCTTTGGACATAACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGTAATAATTTGATTGGCCCAATACCAGATTTCACAGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGATAGGTGCACTCCCAACCTCTTTGGCAAACCTTCCAAATTTGAGGGAACTGTATGTCCAAAATAATATGTTATCTGGAACTGTACCATCAAATCTTCTGAGTAAAGATTTGGATTTGATCTACACTGGAAACACTAATCTTCATAAAGGTAGCAGAAAAAAGACTCACTTGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCCGTTCTACTTTTGGCCACTATTATATCGTGCTTCATTATACGTAAAGGAAAGACAAAAGATTGTGAACAAAGTAGGATTCTGAATCAAAATTATGTATGTTTTCTTTCTGAGATGTTTGAGATGGCAGAAGACAGACTTATTTCTCACCCCTCTCAAAATATGGATTCTTCTAAGACCATTGGTCCTTCTGAAGCTGCACACTGCTTCAGCTATTCTGAAATTGAAAGTTCTACAAATAATTTTGAGAAGAAAATTGGTTCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACTGAGAGATGGAAAAGAGATAGCTGTTAAAGTTCTAACCAGTAATTCCTATCAGGGCAAACGAGAGTTCTCCAACGAGGTGACGCTTCTCTCAAGAATACATCACAGAAATCTGGTACAGCTTCTCGGGTATTGCCGAGAAGAAGGAAATAGCATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAGCATCTTTATGAACCATTGACACATGGAAGGAGTATCAATTGGATGAAGCGCCTTGAGATTGCAGAAGACTCTGCTAAAGGGATTGAATATCTTCACACAGGTTGTGTTCCTGCAGTCATCCATCGAGACTTGAAAAGCAGCAACATTCTTCTTGACAGACACATGAGAGCCAAGGTTTCAGATTTCGGTCTCTCAAAACTTGCCGTGGATGGAGCCGCCCATGCAAAATTACACATTGAGAGTGGAGATATACAAGGCATCATTGATCCTGTGCTACAAAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCACATGGACACATGCGACCGTCGATTTCAGAGGTTCTAAAGGAGATCCAAGATGCAATTGCTATTGAGAGAGAGGCAGAAGAAGGAAACTCAGATGAGCCAAGAAATTCAGTTAATTCTTCAATTAACATGGGTTCTATGGATATGGCTGCAACTGAGAACTATCTCTCAATTGATGAATCCATTGGACAGCCTACTGCACGATAG	2184	0.3924	MENRVSSSFFFFFLFLSSYSLLRLSSAQMPGFVSIDCGGKRKFTDEIGIKWTPDDKIRYGEISTISVDNERRKQYTTLRHFPADSRKYCYTLNVISRTRYLLRASFLYGNFDANNVYPKFDIFIGATHWSTIVISDANTIETRELIFLALSPTVSVCLSNATTGKPFISSLELRQFNGSVYYTYTEEHFYLSVSARINFGAGSDAPIRYPDDPFDRIWESDSVKRANYLVDEKLYLVYFHTTPQQIGHKKGVTLVYLFHGHGLLSSKNLTGNIPLDITKLTGLVELWLDGNNLIGPIPDFTGCMDLKIIHLENNQLIGALPTSLANLPNLRELYVQNNMLSGTVPSNLLSKDLDLIYTGNTNLHKGSRKKTHLYVIIGSAVGAAVLLLATIISCFIIRKGKTKDCEQSRILNQNYVCFLSEMFEMAEDRLISHPSQNMDSSKTIGPSEAAHCFSYSEIESSTNNFEKKIGSGGFGVVYYGKLRDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYEPLTHGRSINWMKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGAAHAKLHIESGDIQGIIDPVLQNNYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEEGNSDEPRNSVNSSINMGSMDMAATENYLSIDESIGQPTAR	727

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed8g0372	727	SUPERFAMILY	L domain-like	264	367	-	-
	Aed8g0372	727	ProSiteProfiles	Protein kinase domain profile.	463	727	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed8g0372	727	Gene3D	Phosphorylase Kinase; domain 1	435	538	-	-
	Aed8g0372	727	Gene3D	Ribonuclease Inhibitor	231	362	IPR032675	-
	Aed8g0372	727	MobiDBLite	consensus disorder prediction	683	702	-	-
	Aed8g0372	727	ProSitePatterns	Protein kinases ATP-binding region signature.	469	491	IPR017441	GO:0005524
	Aed8g0372	727	Pfam	Protein tyrosine and serine/threonine kinase	465	614	IPR001245	GO:0004672\|GO:0006468
	Aed8g0372	727	Pfam	Malectin-like domain	35	222	IPR024788	-
	Aed8g0372	727	PANTHER	OS07G0107800 PROTEIN-RELATED	15	232	-	-
	Aed8g0372	727	PANTHER	OS07G0107800 PROTEIN-RELATED	263	620	-	-
	Aed8g0372	727	Gene3D	Transferase(Phosphotransferase) domain 1	539	619	-	-
	Aed8g0372	727	Gene3D	Transferase(Phosphotransferase) domain 1	620	703	-	-
	Aed8g0372	727	PANTHER	TYROSINE KINASE DOMAIN PROTEIN	263	620	-	-
	Aed8g0372	727	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	585	597	IPR008271	GO:0004672\|GO:0006468
	Aed8g0372	727	PANTHER	OS07G0107800 PROTEIN-RELATED	620	727	-	-
	Aed8g0372	727	SUPERFAMILY	Protein kinase-like (PK-like)	438	673	IPR011009	-
	Aed8g0372	727	SMART	serkin_6	463	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed8g0372	727	PANTHER	TYROSINE KINASE DOMAIN PROTEIN	620	727	-	-
	Aed8g0372	727	PANTHER	TYROSINE KINASE DOMAIN PROTEIN	15	232	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed8g0372	Aed-Chr8	3083493	3090432	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed8g0372	264	573	Receptor kinase-like Gene Family	AT2G37050	60.323	1.25e-119	373

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Aed8g0372		Malectin_like	5.7e-52	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed8g0372	-		-	gmx:100798007	605.905