Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0365 ATGACAAGGGTTGTCCAGATGAGTGTTGATGATGGCGACAGCAAAGAGCTGAAAGAACTGAATCAGCAGTTACAAGATGGGAACAAGATTGTTGGTGGGGAATGGGGTTTAAGCGAGGGTGATGAAGTGAAATGTAACGGAGTAGCTGAAGAAATTAAGGTTGGACAGGGGGGTACTGTGGAGTCCTCCTCTGTTCAGCAGCATGTACCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGATTTTTGCATGTTAGATCCCTTAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTACAAGCTTGGAAGATATTGGATGATTCAACCAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACCCGGAAACATATTCCAGTAGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAGACCCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGATGAAGATGATAATGGAAGCTTAGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCAGTTTCCCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATGGGTGGGAACAGGGTGGTTCCTCTAGCTGCAAAGGAGTGTCCAGAACAGAAGGAACAACTTGTCAAAACTGCAGGTTCTGAACATAGCAATGCACCTGGTGTGAGCCCCTCTAAATTCAATGAGCAAATTAATAGAGGACAACTGGACCTTAATTGTGAAAATCATTCTAGCAAGCTAAGGTGCAAAGGTTCATCACTGTCTGATGGCATTACTAGTAGCACTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCCTAAATAAAAGACCCAGGTCCTTAGATATTGAAAATAAAGTTACCAATAATGCTGAGGAATTGCCATCTATTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTAAAGACGCTGGTAATACAATTCAGGATGATCGGAATGTTTTAAGACGTTCTGATCAGTCTGCCTTCTCAAGGTACAATACAACCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGCAATTCTCCACATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTAGCGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACGAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAGTTAGCAGTGGCATCAACAACCAAATCTTTGTACCAAACATCTGCTTTCCAGCCTGTGAAAAACAACCTTGCCTGTACCTCTCAACAAGTTGTCTTACATAGTACTGAAGATATGACTGCAACAATGCTGGCACCACCTAAAGTAGACAGACATAAAGATTCTGCAGCTCCAGACTGCCATCTCCATTATGAAAACCACAACTGTGTTGCTGACAACTTGAAGCACCAGCTGCCACCTGATCATGATGCTGAATCTATAAAGAAAATGGCTACTGCTGCTCCACATTGTGGGTCATCAAATGTGGTTGAAGTGCTGGTTGAAGGTAATGTTGGAAACCACAGTATCAATAGAAGTGCTTCAGGCAGCAACAATGGAAGTAATGGACAGAATGGGAGCAGCACAGCAGTTAATGCTGGAGGGACAAACATGGAAAGCAACAATGGACTCACTGGGAATAGTGGTAGTGGTGATGCTAGTGGAAATGGAAGTGCCAACAGAGTAGATCAAAACCAGACTTCTCAAAGGGAAGCGGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAGAGAAGGGAGAGGAACTGGAAATTATTGGTAGATATATTGGAGACTATCTCCTTCACTCAGTGGTTGACATCTGTAAACACGTTCGATATCAGAGCAGAAAGAGATTGGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGTCCTCTAACGAAAATGCAAGTGATGCAACAACAGATATCTGATTCCAGAGCATTTGCCACAATGGCATAA 2355 0.4221 MTRVVQMSVDDGDSKELKELNQQLQDGNKIVGGEWGLSEGDEVKCNGVAEEIKVGQGGTVESSSVQQHVPQPQGAIICWERFLHVRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILDDSTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKHIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEMGGNRVVPLAAKECPEQKEQLVKTAGSEHSNAPGVSPSKFNEQINRGQLDLNCENHSSKLRCKGSSLSDGITSSTSDSQMHSGEFEALNKRPRSLDIENKVTNNAEELPSIELSLKRLRGVKDAGNTIQDDRNVLRRSDQSAFSRYNTTSNTKKSPTGCVGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTNNAYAKSAVISELAVASTTKSLYQTSAFQPVKNNLACTSQQVVLHSTEDMTATMLAPPKVDRHKDSAAPDCHLHYENHNCVADNLKHQLPPDHDAESIKKMATAAPHCGSSNVVEVLVEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMESNNGLTGNSGSGDASGNGSANRVDQNQTSQREAALTKFRQKRKERRERNWKLLVDILETISFTQWLTSVNTFDIRAERDWLNNDLDFVDNLCDSPLTKMQVMQQQISDSRAFATMA 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0365 784 MobiDBLite consensus disorder prediction 444 476 - -
Aed8g0365 784 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 31 713 - -
Aed8g0365 784 MobiDBLite consensus disorder prediction 212 284 - -
Aed8g0365 784 SUPERFAMILY CheY-like 86 212 IPR011006 -
Aed8g0365 784 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 713 IPR045279 GO:0009736
Aed8g0365 784 MobiDBLite consensus disorder prediction 212 229 - -
Aed8g0365 784 Pfam Response regulator receiver domain 90 201 IPR001789 GO:0000160
Aed8g0365 784 MobiDBLite consensus disorder prediction 637 700 - -
Aed8g0365 784 MobiDBLite consensus disorder prediction 369 388 - -
Aed8g0365 784 MobiDBLite consensus disorder prediction 434 510 - -
Aed8g0365 784 MobiDBLite consensus disorder prediction 487 510 - -
Aed8g0365 784 CDD psREC_PRR 90 193 - -
Aed8g0365 784 ProSiteProfiles Response regulatory domain profile. 89 207 IPR001789 GO:0000160
Aed8g0365 784 Gene3D - 87 244 - -
Aed8g0365 784 SMART REC_2 88 203 IPR001789 GO:0000160
Aed8g0365 784 MobiDBLite consensus disorder prediction 369 396 - -
Aed8g0365 784 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0365 Aed-Chr8 3017704 3025819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0365 164 713 Response Regulator Gene Family AT5G02810 46.622 1.04e-101 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g0365 Response_reg 1.7e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0365 K12129 - gmx:100796933 1160.21