LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed8g0365	ATGACAAGGGTTGTCCAGATGAGTGTTGATGATGGCGACAGCAAAGAGCTGAAAGAACTGAATCAGCAGTTACAAGATGGGAACAAGATTGTTGGTGGGGAATGGGGTTTAAGCGAGGGTGATGAAGTGAAATGTAACGGAGTAGCTGAAGAAATTAAGGTTGGACAGGGGGGTACTGTGGAGTCCTCCTCTGTTCAGCAGCATGTACCACAGCCTCAAGGGGCAATAATTTGTTGGGAGAGATTTTTGCATGTTAGATCCCTTAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTACAAGCTTGGAAGATATTGGATGATTCAACCAATCATATTGATCTCATTTTAACTGAGGTGGCAATGCCTGGCTTATCAGGCATTGGTCTTCTATACAAGATTATGGGCCACAAAACCCGGAAACATATTCCAGTAGTTATGATGTCATCTCATGATTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGAAGATGTCACAGTTCTAGTGGGAGTGGCAGTGAAAGTGGCACACAGACCCAGAAGTCTGTAAAATCAAAGAGTCTTGAGAAGTCTGATAATAATTCTGGAAGCAATGATGAAGATGATAATGGAAGCTTAGGCCTGAATAATGGGGATGGAAGTGACAATGGTAGTGGCACTCAGAGCTCATGGACCAAACGTGCTGTAGAAGTTGATAGTCCTAAACCAGTTTCCCAGTGGGATCAAATAGCTGAGTGCCCTGACAGTACCTGTGCTCAAGTTGTTCACTCCAATGCTGAAATGGGTGGGAACAGGGTGGTTCCTCTAGCTGCAAAGGAGTGTCCAGAACAGAAGGAACAACTTGTCAAAACTGCAGGTTCTGAACATAGCAATGCACCTGGTGTGAGCCCCTCTAAATTCAATGAGCAAATTAATAGAGGACAACTGGACCTTAATTGTGAAAATCATTCTAGCAAGCTAAGGTGCAAAGGTTCATCACTGTCTGATGGCATTACTAGTAGCACTTCTGATTCTCAGATGCATAGTGGAGAATTTGAAGCCCTAAATAAAAGACCCAGGTCCTTAGATATTGAAAATAAAGTTACCAATAATGCTGAGGAATTGCCATCTATTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTTAAAGACGCTGGTAATACAATTCAGGATGATCGGAATGTTTTAAGACGTTCTGATCAGTCTGCCTTCTCAAGGTACAATACAACCTCTAACACTAAGAAATCTCCCACTGGATGTGTTGGAAGCAATTCTCCACATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGATATTCAATCTCATTCTAGCGGCAATCCTCCTAACCAAAACTCAAATGGTGCTAGCAATAACATTGATATGGGTTCCACTACGAATAATGCTTATGCTAAATCTGCAGTTATAAGTGAGTTAGCAGTGGCATCAACAACCAAATCTTTGTACCAAACATCTGCTTTCCAGCCTGTGAAAAACAACCTTGCCTGTACCTCTCAACAAGTTGTCTTACATAGTACTGAAGATATGACTGCAACAATGCTGGCACCACCTAAAGTAGACAGACATAAAGATTCTGCAGCTCCAGACTGCCATCTCCATTATGAAAACCACAACTGTGTTGCTGACAACTTGAAGCACCAGCTGCCACCTGATCATGATGCTGAATCTATAAAGAAAATGGCTACTGCTGCTCCACATTGTGGGTCATCAAATGTGGTTGAAGTGCTGGTTGAAGGTAATGTTGGAAACCACAGTATCAATAGAAGTGCTTCAGGCAGCAACAATGGAAGTAATGGACAGAATGGGAGCAGCACAGCAGTTAATGCTGGAGGGACAAACATGGAAAGCAACAATGGACTCACTGGGAATAGTGGTAGTGGTGATGCTAGTGGAAATGGAAGTGCCAACAGAGTAGATCAAAACCAGACTTCTCAAAGGGAAGCGGCCTTAACTAAATTTCGCCAAAAGAGAAAAGAGAGAAGGGAGAGGAACTGGAAATTATTGGTAGATATATTGGAGACTATCTCCTTCACTCAGTGGTTGACATCTGTAAACACGTTCGATATCAGAGCAGAAAGAGATTGGCTGAACAACGACCTCGATTTCGTGGACAATTTGTGCGACAGTCCTCTAACGAAAATGCAAGTGATGCAACAACAGATATCTGATTCCAGAGCATTTGCCACAATGGCATAA	2355	0.4221	MTRVVQMSVDDGDSKELKELNQQLQDGNKIVGGEWGLSEGDEVKCNGVAEEIKVGQGGTVESSSVQQHVPQPQGAIICWERFLHVRSLKVLLVEIDDSTRHVVTALLRNCSYEVIEAANGLQAWKILDDSTNHIDLILTEVAMPGLSGIGLLYKIMGHKTRKHIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSLEKSDNNSGSNDEDDNGSLGLNNGDGSDNGSGTQSSWTKRAVEVDSPKPVSQWDQIAECPDSTCAQVVHSNAEMGGNRVVPLAAKECPEQKEQLVKTAGSEHSNAPGVSPSKFNEQINRGQLDLNCENHSSKLRCKGSSLSDGITSSTSDSQMHSGEFEALNKRPRSLDIENKVTNNAEELPSIELSLKRLRGVKDAGNTIQDDRNVLRRSDQSAFSRYNTTSNTKKSPTGCVGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTNNAYAKSAVISELAVASTTKSLYQTSAFQPVKNNLACTSQQVVLHSTEDMTATMLAPPKVDRHKDSAAPDCHLHYENHNCVADNLKHQLPPDHDAESIKKMATAAPHCGSSNVVEVLVEGNVGNHSINRSASGSNNGSNGQNGSSTAVNAGGTNMESNNGLTGNSGSGDASGNGSANRVDQNQTSQREAALTKFRQKRKERRERNWKLLVDILETISFTQWLTSVNTFDIRAERDWLNNDLDFVDNLCDSPLTKMQVMQQQISDSRAFATMA	784

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	444	476	-	-
	Aed8g0365	784	PANTHER	TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37	31	713	-	-
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	212	284	-	-
	Aed8g0365	784	SUPERFAMILY	CheY-like	86	212	IPR011006	-
	Aed8g0365	784	PANTHER	TWO-COMPONENT RESPONSE REGULATOR	31	713	IPR045279	GO:0009736
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	212	229	-	-
	Aed8g0365	784	Pfam	Response regulator receiver domain	90	201	IPR001789	GO:0000160
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	637	700	-	-
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	369	388	-	-
	Aed8g0365	784	MobiDBLite	consensus disorder prediction	434	510	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed8g0365	Aed-Chr8	3017704	3025819	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed8g0365	164	713	Response Regulator Gene Family	AT5G02810	46.622	1.04e-101	324

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Aed8g0365		Response_reg	1.7e-20	CL0304

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed8g0365	K12129		-	gmx:100796933	1160.21

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