Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0360 ATGATGGTTAGATCCTGTTGGAAGCCAATTGCTGATGGTGATGAAGGAGATGGGAGTGGGAGAGTTGATGGACTTCTATGGTACAAGGATTTGGGGAACCATCTTTATGGTGAATTCTCAATGGCTGTGGTTCAGGCCAATAGTTCACTAGAGGATCGAGGTGAACTTGAGTCTGGACCCTTGAGTTCCAATCACTTGGGTCCTCAAGGGACCTTTATAGGTGTTTATGATGGCCATGGTGGAAGCGAGGCCTCACAGTTTGTTAGTGACAACCTCTTCTCCAATCTCAAAAGGCTTGCAGCTGAAAACCAAGGTATGTCAGAACATGTTATCAAAAGGGCTTATGCAGCAACAGAGGAGAGTTTTCTGTCTCTTGTGAAGAAGCAGTGGCTGAGTAAGCCACAGATTGCATCAGCAGGCACTTGTTGTTTGGTGGGGTTAATTTGCAGTGGCATGATATATGTTGCAAATTCTGGAGACTCCCGGGTTGTGTTGGGAAGAGTAGAGAGAGCTACAAGGGAAACAGAAGCTCTACAGTTATCTACAGAACACAATGTTAACCAAGAAACAGTGAGAGATGAACTTCGATCAAAGCACCCCTTTGATTCACAAATCGTGGTTTTGAGACAAAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGGGATGCATATCTGAAGAAAGCAGAATTCAACAGGGAGCCTCTACCAGCAAAGTATAGACTAGCAGAAACATTCTTCAGGCCAATTCTTAGTTGTGAGCCATCAACATCAACACACACACTCCACCCTGATGATCAATTTCTCATATTTGCTTCTGATGGCTTATGGGAGCATCTCACCAACCAAGAGGCTGGAATTGCTAGAAGGCTTGTGAAAGCTGCGCTTAGAGAAGCAGCTAAGAAGTGTGAAATGAGACTTTCTGACCTACAAAAGATAGAGCAAGGAATGAGGAGACACATCCATGATGACATAACAGTGATTGTGGTGTTTCTCAATTCCAAACTCACTGAGAATACCTCTCTCTGTGGTTCTCCTCTTTCAATCAAGGGAGGTGGCTCTGCCAATTCCTAG 1086 0.4466 MMVRSCWKPIADGDEGDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANSSLEDRGELESGPLSSNHLGPQGTFIGVYDGHGGSEASQFVSDNLFSNLKRLAAENQGMSEHVIKRAYAATEESFLSLVKKQWLSKPQIASAGTCCLVGLICSGMIYVANSGDSRVVLGRVERATRETEALQLSTEHNVNQETVRDELRSKHPFDSQIVVLRQNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPAKYRLAETFFRPILSCEPSTSTHTLHPDDQFLIFASDGLWEHLTNQEAGIARRLVKAALREAAKKCEMRLSDLQKIEQGMRRHIHDDITVIVVFLNSKLTENTSLCGSPLSIKGGGSANS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0360 361 CDD PP2Cc 36 336 IPR001932 -
Aed8g0360 361 Coils Coil 297 317 - -
Aed8g0360 361 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169
Aed8g0360 361 Gene3D - 29 345 IPR036457 -
Aed8g0360 361 PANTHER ALPHABET, ISOFORM E-RELATED 3 359 - -
Aed8g0360 361 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 359 - -
Aed8g0360 361 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Aed8g0360 361 SUPERFAMILY PP2C-like 64 337 IPR036457 -
Aed8g0360 361 SMART PP2C_4 32 334 IPR001932 -
Aed8g0360 361 ProSiteProfiles PPM-type phosphatase domain profile. 35 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0360 Aed-Chr8 2957957 2961097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0360 2 357 PP2C-type Phosphatase Gene Family AT3G12620 63.686 1.46e-175 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0360 K01102 - gmx:100819870 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0039 4 275913 278453 Aed8g0360 8 2957957 2961097 PCT