Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0344 ATGATAATCATTGAAGCGAGGATAAAGGTATACGAGCTTAGGAACAAGAACAAGGCGGAGCTGCTGACTCAGCTGAAGGATCTCAAGGCGGAGCTCGCCCTCCTCCGCGTCGCCAAGGTCACCGGCGGCGCCCCAAACAAGCTCTCCAAAATCAAGGTGGTTCGGCTTTCGATAGCGCAGGTTTTGACGATTATTTCCCAAAAGCAGAAAGCGGCGCTGAGAGAGGCTTACAAGAATAAGAAGTATTTGCCACTTGACCTTCGTCCCAAGAAGACCCGCGCCATTCGCAGACGCCTTACCAAACACCAGGCGTCTTTGAAGACAGAACGTGAGAAGAAGAAGGAACTGTACTTTCCAATAAGAAAGTATGCGATCAAAGTTTAG 384 0.4974 MIIIEARIKVYELRNKNKAELLTQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTIISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPIRKYAIKV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0344 127 Pfam Ribosomal L29 protein 12 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Aed8g0344 127 Hamap 50S ribosomal protein L29 [rpmC]. 8 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Aed8g0344 127 PANTHER 60S RIBOSOMAL PROTEIN L35 6 127 IPR045059 GO:0000463|GO:0022625
Aed8g0344 127 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 6 127 - -
Aed8g0344 127 SUPERFAMILY Ribosomal protein L29 (L29p) 8 69 IPR036049 GO:0003735|GO:0005840|GO:0006412
Aed8g0344 127 TIGRFAM L29: ribosomal protein uL29 12 68 IPR001854 GO:0003735|GO:0005840|GO:0006412
Aed8g0344 127 CDD Ribosomal_L29_HIP 12 68 - -
Aed8g0344 127 Gene3D - 6 81 IPR036049 GO:0003735|GO:0005840|GO:0006412
Aed8g0344 127 Gene3D - 82 127 - -
Aed8g0344 127 Coils Coil 11 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0344 Aed-Chr8 2846969 2848083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0344 6 127 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 89.344 1.51e-72 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0344 K02918 - gmx:100778013 224.172