Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed8g0335 | ATGAAGAGACAGAGAGATGGAGTAGTAGAGAACATAGATTTGGCAAATTGTCTAATGTTGCTCTCTCACACTAAAGAAATCAAACCCCAAAAACCTCTGGGCCCTGAAGAATTCGAGTGTATGACATGCAACCGCAAATTCTCTTCGTTTCAGGCCCTCGGTGGCCACAGGGCCAGCCACAAGAAGCCCAAACCAGACGTTAAAGAAGAGAGCAAAATTTTGATGTTGGACAAAAAGCCCAAAAAACACGAGTGCTCCATTTGTGGTAAGGTATTCACTTTGGGCCAGGCACTGGGAGGACACATGAAAACACACAGAATTGTCGTTGACCAAGGACTCTCTTCAATAAAGCATCATGTTGTAGTAAAAGTCCCTGTGCTTAAAAGGTTGAATAGTACGAGGCTTATGTGCTTGGACTTGAACTTGACTCCTCTGCAGAATGACTTGAAGTTATTGTTTGGAGACAAGGCACCCAAAGTTGATTCCTTCGTCTGA | 495 | 0.4384 | MKRQRDGVVENIDLANCLMLLSHTKEIKPQKPLGPEEFECMTCNRKFSSFQALGGHRASHKKPKPDVKEESKILMLDKKPKKHECSICGKVFTLGQALGGHMKTHRIVVDQGLSSIKHHVVVKVPVLKRLNSTRLMCLDLNLTPLQNDLKLLFGDKAPKVDSFV | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed8g0335 | 164 | Gene3D | Classic Zinc Finger | 36 | 105 | - | - | |
Aed8g0335 | 164 | SUPERFAMILY | beta-beta-alpha zinc fingers | 38 | 105 | IPR036236 | - | |
Aed8g0335 | 164 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 85 | 105 | IPR013087 | - | |
Aed8g0335 | 164 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 159 | - | - | |
Aed8g0335 | 164 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 40 | 60 | IPR013087 | - | |
Aed8g0335 | 164 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 1 | 159 | - | - | |
Aed8g0335 | 164 | SMART | c2h2final6 | 38 | 60 | IPR013087 | - | |
Aed8g0335 | 164 | SMART | c2h2final6 | 83 | 105 | IPR013087 | - | |
Aed8g0335 | 164 | Pfam | C2H2-type zinc finger | 38 | 63 | - | - | |
Aed8g0335 | 164 | Pfam | C2H2-type zinc finger | 83 | 107 | - | - | |
Aed8g0335 | 164 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 83 | 105 | IPR013087 | - | |
Aed8g0335 | 164 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 38 | 65 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed8g0335 | Aed-Chr8 | 2793778 | 2794272 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed8g0335 | 1 | 161 | C2H2 Transcription Factor Family | AT2G37430 | 48.851 | 2.80e-43 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aed8g0335 | zf-C2H2_6 | 1.4e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed8g0335 | - | - | gmx:100793243 | 260.381 |