Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0308 ATGAGAGGTCCCAAGAGAGCATCCAAGATCCAAAAGCTTTTCAACCTGTCTAAGGAGGATGATGTTAGGAAGTATGTCAACACCTACCGACATACATTTACGTCAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCTAAGATTCAAAGACTGGTCACTCCTCTTACGCTCCAAAGGAAGTGTGCAAGAATTGCCAAGGCAAAGTCAGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCCAGTTTGAAGGAGCAGAGGGAGCGTCACAGTGAGAGTTTGGCTAAGAAGAGATCCAGGATTTCCAGTGCTACCAAGGCAGCTAGCTGTATAAGCTTCTGCATCAGAAATAGATTTAAGGGGAAAAAATGA 366 0.4536 MRGPKRASKIQKLFNLSKEDDVRKYVNTYRHTFTSKAGKKVSKAPKIQRLVTPLTLQRKCARIAKAKSEAAEYQKLLASSLKEQRERHSESLAKKRSRISSATKAASCISFCIRNRFKGKK 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0308 121 PANTHER 40S RIBOSOMAL PROTEIN S6 1 106 IPR001377 GO:0003735|GO:0005840|GO:0006412
Aed8g0308 121 Gene3D - 1 94 - -
Aed8g0308 121 Coils Coil 56 98 - -
Aed8g0308 121 PANTHER 40S RIBOSOMAL PROTEIN S6 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0308 Aed-Chr8 2585893 2586258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0308 1 110 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 74.359 4.59e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0308 K02991 - gmx:100804076 176.022