Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0297 ATGGCTGCCACCGCCAATCCCATAGTTGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCTTGGATAGATGGCGAGGTTTTGGAGGTTAAGGGAGAAGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAACTTCTAATGTTTATCATAAAGATACCGAAGTCCCACCATGTGGAGTGGATGATATGACAAAACTTGCTTATCTACATGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGACATCAATGAAATTTATACTTACACCGGGAATATATTAATTGCTGTGAATCCTTTCATAAAGCTTCCTCATTTATACGATAGCCATATGATGGCACAATATAAGGGAGCAGGTTTTGGTGAGCTAAGTCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGACTTATGATTAATGAGGGAATCAGCCAGGCAATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACTAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGTTAATAATGCTGCTGAAGGTAGAACTGTTGAGCAGAAAGTCCTTGAGTCCAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACCGTTAGAAACAATAATTCAAGCTCTTATTGTTTGGTGTATGATGATATTCAGAAGTACAAATTAGGAAATCCTAGAACATTTCATTATCTGAATCAAACAAATTGCTTTGAGTTGGAAGGGGTTGATGAGTTAAAAGAATATCAAGATACGAGGAGAGCAATGGATGTTGTTGGAATAAGTTTTGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTACAAAAGGGAAAGAAATTGACTCATCTGAGCCGAAAGATGAAAAATCTTGGTTTCATCTACGAACTTCTGCTGAACTTTTTATGTGTGATGTAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTGGATAAAATTAATAATTCAATTGGTCAAGACCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGAAACCTGGTGGCATTATTTCTCTTCTTGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTTCCCAAAAGCTGTATCAGACATTCAAAAACCATCAAAGGTTCAGCAAACCCAAATTAGCACGTAGTGACTTCACAATATGCCATTATGCGGGTGATCAACAATTGCAAGCACTACTTGAAACTCTCAGTTCCACTGAGCCACACTACATTCGCTGTGTTAAACCCAATAATTTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTGCAGCAACTGCGATGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCTGGATATCCCACTAGGAAAACTTTTGATGAATTTGTGGATCGATTTGGACTTCTTGCACCTGAAGCTTTGGACAGGAGTTCTGATGAGGTCACTGCTTGCAAGAGGATTCTGGAGAAGGTTGGACTTAAGGGCTATCAGATTGGTAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACGCGCAGAAGTGAGGTCTTAGGAAAGTCAGCAAGCATTATTCAGCGGAAAGTTCGTGCCTATTTGGCCTGCCGAAGTTTTGTCTCGATACGTTTGTCTGCTATACATATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTATGATGGATTGCGGCGGAAGGCTTCTAGTCTGATGATTCAGAGGTATTTCCGCATGCATGTTGCTAGGAAGGCATATAAAGAATTGTATAGCTCGGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCTGCTCGTAGTGAGCTATGCTTCAGGAAGCAAACTAGTGCTGCTATTGCCATTCAGAGCCACTGCCGGAAATACCTGGCACAACATCATTTTACAAACTTAAAGAAGGCAGCGATTGCAACACAAAGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTACGAAATCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGCATGAGGGTCGACATTGAGGAATCAAAAACAAAAGAAAATGAAAAACTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACTAAGTTATTGCTTCAAAAGGAGAGTGAGGCTGCAAAAAGAGAAGCTGAGAGAGGGCCTGTCATACAGGAGGTTCCTGTTGTTGACCATGCTTTGTCAGAGAAGCTCACTAATGAAAATGAGAAACTCAAGTTGAAGACTGATATGCAAAGGTTTTGTTTGTCATCAAAGCTTCTTTGGCTTGAAGAGATATTCTCAGTTATGGAAACTGAAAACCAGGTTCTTCGTCAACAGTCTCTGCTAAACTCATCTGAGAAGTTGGAAAATGGTCACCATGTGGTGGGAGATCAGAAAGCTGCTGAAGCACAAAGTGTGACTGTGAAGAAGTTTGGTACAGAATCTGATGGCAAATTGAGGAGATCTTTCATTGAACGTCAACATAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATTTGTCCGCACTATTGTTTTTGCTCCAGCAAAGTCTGAAATCTGGTGGTGCAGCTGATGCAACTCCTGGTTTTCGTTCATCCCCTTCTGCCACCCCACCACCATTGGAGGTTGTACGCAAGGTAGAAGCTAAATATCCTGCCTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATATGGTATCCTTCGGGACAACTTGAAGAAAGAATTGGCATCATTGCTTTCGTTATGTATCCAGGCACCAAGAGCATCCAAGGGAGTGCTACGATCTGGCCGATCCTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTCTTATAGAATCCCTGAACACTCTCCTCTGTACTCTGAAAGAGAACTTCGTACCTCCAGTCCTTATTCAAAAGATCTACACTCAAACATTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGCCGTGATTGTTGCACATTCAGCAATGGGGAATATGTGAAATCTGGTTTAGCAGAAATGGAGTTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGTTCATCTTGGGATGAGCTTAAGCACATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCAATCATGAGTGTCCAGCAGCTGTACAGAATATGTACACTTTACTGGGATGCAAACTACAATACTCGAAGTGTATCTCCAGATGTTCTTTCAAGCATGAGAGTACTTATGACTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTAGATGACTTCTCTACATCACTGCAAGAGAAGGATTTCTCCGACATGAAACCAGCGGTTGAGCTGCTTGAGAATCCCGCCTTCCGATTTTTAAATGAGTAG 3771 0.4132 MAATANPIVGSHVWVEDSQVAWIDGEVLEVKGEEIKVLCTSGKTVVVKTSNVYHKDTEVPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIKLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQAILVSGESGAGKTESTKLLMRYLAYMGGRVNNAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSSYCLVYDDIQKYKLGNPRTFHYLNQTNCFELEGVDELKEYQDTRRAMDVVGISFEEQEAIFRVVAAILHLGNIEFTKGKEIDSSEPKDEKSWFHLRTSAELFMCDVKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQKPGGIISLLDEACMFPRSTHETFSQKLYQTFKNHQRFSKPKLARSDFTICHYAGDQQLQALLETLSSTEPHYIRCVKPNNFLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDRSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRAYLACRSFVSIRLSAIHIQAACRGQLARQVYDGLRRKASSLMIQRYFRMHVARKAYKELYSSAVSIQTGMRGMAARSELCFRKQTSAAIAIQSHCRKYLAQHHFTNLKKAAIATQSAWRGKVARRELRNLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVDIEESKTKENEKLQSALQEMQLQFKETKLLLQKESEAAKREAERGPVIQEVPVVDHALSEKLTNENEKLKLKTDMQRFCLSSKLLWLEEIFSVMETENQVLRQQSLLNSSEKLENGHHVVGDQKAAEAQSVTVKKFGTESDGKLRRSFIERQHNQDDNDLMAYWLSNLSALLFLLQQSLKSGGAADATPGFRSSPSATPPPLEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASLLSLCIQAPRASKGVLRSGRSFGKDSPMGHWQSLIESLNTLLCTLKENFVPPVLIQKIYTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKSGLAEMELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMTEDSNNAQSDSFLLDDSSSIPFSVDDFSTSLQEKDFSDMKPAVELLENPAFRFLNE 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0297 1256 SMART MYSc_2a 57 598 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PANTHER MYOSIN 223 420 - -
Aed8g0297 1256 Gene3D - 220 266 - -
Aed8g0297 1256 ProSiteProfiles IQ motif profile. 648 677 IPR000048 GO:0005515
Aed8g0297 1256 SMART DIL_2 1077 1184 IPR002710 -
Aed8g0297 1256 Pfam IQ calmodulin-binding motif 652 669 IPR000048 GO:0005515
Aed8g0297 1256 Pfam IQ calmodulin-binding motif 697 716 IPR000048 GO:0005515
Aed8g0297 1256 Pfam IQ calmodulin-binding motif 721 740 IPR000048 GO:0005515
Aed8g0297 1256 Pfam IQ calmodulin-binding motif 626 643 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 599 621 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 622 644 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 695 717 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 718 740 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 670 692 IPR000048 GO:0005515
Aed8g0297 1256 SMART iq_5 647 669 IPR000048 GO:0005515
Aed8g0297 1256 PANTHER MYOSIN-14 420 477 - -
Aed8g0297 1256 Gene3D Kinesin motor domain 29 219 IPR036961 -
Aed8g0297 1256 CDD MyosinXI_CBD 924 1225 IPR037975 GO:0007015
Aed8g0297 1256 Pfam DIL domain 1078 1181 IPR002710 -
Aed8g0297 1256 ProSiteProfiles Myosin motor domain profile. 476 597 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PANTHER MYOSIN 932 1254 - -
Aed8g0297 1256 Gene3D - 421 483 - -
Aed8g0297 1256 Gene3D - 401 420 - -
Aed8g0297 1256 ProSiteProfiles IQ motif profile. 696 725 IPR000048 GO:0005515
Aed8g0297 1256 ProSiteProfiles Myosin motor domain profile. 62 475 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PANTHER MYOSIN-14 932 1254 - -
Aed8g0297 1256 PANTHER MYOSIN-14 476 808 - -
Aed8g0297 1256 PANTHER MYOSIN-14 223 420 - -
Aed8g0297 1256 ProSiteProfiles IQ motif profile. 671 700 IPR000048 GO:0005515
Aed8g0297 1256 Gene3D Myosin VI head, motor domain, U50 subdomain 269 400 - -
Aed8g0297 1256 ProSiteProfiles IQ motif profile. 719 748 IPR000048 GO:0005515
Aed8g0297 1256 Gene3D - 532 595 - -
Aed8g0297 1256 ProSiteProfiles IQ motif profile. 623 652 IPR000048 GO:0005515
Aed8g0297 1256 Pfam Myosin head (motor domain) 224 420 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 Pfam Myosin head (motor domain) 64 217 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 Pfam Myosin head (motor domain) 476 585 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 Coils Coil 742 776 - -
Aed8g0297 1256 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 ProSiteProfiles Dilute domain profile. 924 1202 IPR002710 -
Aed8g0297 1256 Pfam Myosin N-terminal SH3-like domain 9 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 Gene3D - 650 696 - -
Aed8g0297 1256 Gene3D - 697 747 - -
Aed8g0297 1256 Gene3D - 599 649 - -
Aed8g0297 1256 PANTHER MYOSIN-14 7 218 - -
Aed8g0297 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 649 IPR027417 -
Aed8g0297 1256 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PRINTS Myosin heavy chain signature 385 413 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed8g0297 1256 PANTHER MYOSIN 7 218 - -
Aed8g0297 1256 PANTHER MYOSIN 420 477 - -
Aed8g0297 1256 PANTHER MYOSIN 476 808 - -
Aed8g0297 1256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 651 748 IPR027417 -
Aed8g0297 1256 Coils Coil 781 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0297 Aed-Chr8 2501125 2518363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0297 1 1255 Myosins gene family AT5G43900 60.821 0.0 1737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0297 K10357 - ath:AT1G04160 1639.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0297 8 2501125 2518363 Aed8g0297 8 2501125 2518363 ECH
Aed8g0297 8 2501125 2518363 Aed4g0101 4 711042 723249 PCT