Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0296 ATGGATGAGAAAGCCAAGAAAAAGGGGAGAAAAGATTCTGAAGTTATGAATGGTAATGTTGCTGATGATAAAGAAGTGGAGTTCTTGGATGACAGCCAAGAAAACGGGAAAACGAGGAAGGATGATAGGTTAAAAAGCAATGAAGGTGAAGATGATGACCAAGGTAAGCCGATGAAAAAGAAAAAGAAGAAGAGATCAGCTGCGGAAAGCCAACATGAGGATTGCAATGAAGATAAAGATGACAGTCAATACAAGAAGGAGAAGGAGGAAAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAAACTCATTATTATGAGTTTGAAAGCAATGAAGGTGGAGATGGTGACCAAGGTAAGAAGATGAAGAAGAAGAAACTGAGTGAAGAAAGCAAAATTAAGGAGAATTATGAGTTCAATAGCAAGGTGATGAAGAAGGAGAAGAAATCAGATGCAGCAAGCCAACTTGAGGATCACAATGAATTTAAAAGCAATGAAGATAAAGATGACAGTCAATGCAAGAAGGAGAAGGAGGAAAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGCATAATGAGTTTAAAAGCAATGAAGGTGAAGACGATGGTCAAGCTAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGCATAATGAGTTGGAAAGTAATGAAGGTAAAGATGATGGTCAAGGTAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGTATAATAAGTTTGAAAGCAATGAAGGTGAAGATGATGGCCATGGTAAGAAGAAGAAGAAGAAGAAGAATAAAAAACTGAGTGAAGAAAGCAAAAGTAATGAAGGTGAAGATGATGGCCAAGGTAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGTATAATGAGTTTGAAAGCAATGAAGGTGAAGATGATGGCCAAGGTAAGCAGGTGGAGAAGAAGAAACTACGTGACAAAAGCAAAAATAAGGAGAATAGCGAGTTCAATAGCAATGAAGGTGATGTCACGGAATCTCCTAATCTTGCACACAGTGGATCATCCAAACCCAAACGAGTCACTTTTTCTGATCAAGTGGATATTTGTTGTGATGGCTTAATCCGTGGGAAAAGGTTTACACCTGAAGAAGATGACAAGATTCAAAAGGCTGTTTATGATTATATAGAGTCACATGGTTTGGGAGATGAAGGTCTAGATATGGTGCTCCATTGCATGTCTCATCGTCAAGTTAGAAATTGTTGGAAGGAAATTGGAGCAGCCTTACCTCATAGGCCTCATAATAGTGTTTATATGCGTGCTCATATTTTGTTTGAAAGGGGTGAGAAGCGTAAGTGGACACCTGAAGAGTATGAATTTCTACGGAATTGTCAGGCACAACATGGATCTGATTGGAAAACAGTAGCTGAAGCATTGGGCAAACATCGATTTCATAATAAAATTAACCAACAAAAACCAAGGACGATGGACCCAAGAGGAATATCAAAATTTATTTAA 1566 0.3774 MDEKAKKKGRKDSEVMNGNVADDKEVEFLDDSQENGKTRKDDRLKSNEGEDDDQGKPMKKKKKKRSAAESQHEDCNEDKDDSQYKKEKEEKKRKKKKLSEESKSKETHYYEFESNEGGDGDQGKKMKKKKLSEESKIKENYEFNSKVMKKEKKSDAASQLEDHNEFKSNEDKDDSQCKKEKEEKKRKKKKLSEESKSKEHNEFKSNEGEDDGQAKKRKKKKLSEESKSKEHNELESNEGKDDGQGKKRKKKKLSEESKSKEYNKFESNEGEDDGHGKKKKKKKNKKLSEESKSNEGEDDGQGKKRKKKKLSEESKSKEYNEFESNEGEDDGQGKQVEKKKLRDKSKNKENSEFNSNEGDVTESPNLAHSGSSKPKRVTFSDQVDICCDGLIRGKRFTPEEDDKIQKAVYDYIESHGLGDEGLDMVLHCMSHRQVRNCWKEIGAALPHRPHNSVYMRAHILFERGEKRKWTPEEYEFLRNCQAQHGSDWKTVAEALGKHRFHNKINQQKPRTMDPRGISKFI 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0296 521 MobiDBLite consensus disorder prediction 67 277 - -
Aed8g0296 521 CDD SANT 468 502 IPR001005 -
Aed8g0296 521 Pfam Myb-like DNA-binding domain 466 497 IPR001005 -
Aed8g0296 521 PANTHER GB|AAC33480.1 5 502 - -
Aed8g0296 521 Coils Coil 174 201 - -
Aed8g0296 521 MobiDBLite consensus disorder prediction 287 355 - -
Aed8g0296 521 MobiDBLite consensus disorder prediction 1 375 - -
Aed8g0296 521 SUPERFAMILY Homeodomain-like 443 501 IPR009057 -
Aed8g0296 521 MobiDBLite consensus disorder prediction 356 375 - -
Aed8g0296 521 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 466 508 IPR017930 -
Aed8g0296 521 SMART sant 392 463 IPR001005 -
Aed8g0296 521 SMART sant 465 506 IPR001005 -
Aed8g0296 521 MobiDBLite consensus disorder prediction 1 58 - -
Aed8g0296 521 PANTHER GB|AAC33480.1 5 502 - -
Aed8g0296 521 Coils Coil 58 78 - -
Aed8g0296 521 Coils Coil 277 297 - -
Aed8g0296 521 Gene3D - 458 513 - -
Aed8g0296 521 Coils Coil 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0296 Aed-Chr8 2481902 2486538 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed8g0296 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0296 - - gmx:100785842 436.032