Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0292 ATGGCTACTACTCAAGGACAAGTCATTACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAGCCACTGTCCATCGAGGACGTTCAGGTGGCGCCGCCGCAGAACGGCGAGGTCCGTATCCAAATTCTCTACACTGCTCTCTGTCACACCGATGCTTACACTTGGAGCGGCAAGGATCCAGAAGGTCTTTTCCCATGTATACTTGGTCATGAGGCTGCAGGGATTGTGGAAAGTGTTGGAGAAGGCGTAACTGCAGTTCAGGCTGGCGATCATGTCATCCCTTGTTACCAGGCTGAGTGTGGAGAGTGCAAGCTTTGCAAATCAGGCAAAACCAATCTCTGTGGCAAAGTTAGAGCTGCCACTGGAGTAGGGGTCATGCTGAGCGATCGCAAGAGCCGTTTCTCTGTAAATGGAAAACCCATCTACCATTTTATGGGAACCTCCACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTAGCTAAGATTGACCCTAATGCTCCTCTGGACAAAGTTTGTCTTCTTGGATGTGGTGTTCCAACTGGCCTTGGAGCTGTCTGGAACACTGCAAAGGTGGAACAAGGGTCAATTGTTGCTATTTTTGGCCTTGGAACTGTTGGGCTTGCAGTTGCAGAGGGTGCAAAAGCTGTTGCAAAGAACTTTGGAGTCACCGAGTTTATTAATCCAAAAGAGCATGAGAAACCAATTCAGCAGGTCATAGTTGATCTCACAGATGGTGGAGTTGATTATAGTTTTGAGTGCATCGGAAATGTCTCAGTGATGAGGTCTGCCTTGGAATGCTGCCATAAGGAAATTTGCACTCAACCTTTCCAACTGGTGACTGGGCGTGTGTGGAAAGGAACAGCCTTTGGTGGCTTCAAGAGCCGCTCACAAGTGCCTTGGCTTGTAAACAAGTACTTGAAGAAGGTAAAGGTTTTGAAATTTTGA 951 0.4774 MATTQGQVITCKAAVAWEPNKPLSIEDVQVAPPQNGEVRIQILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTAVQAGDHVIPCYQAECGECKLCKSGKTNLCGKVRAATGVGVMLSDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPNAPLDKVCLLGCGVPTGLGAVWNTAKVEQGSIVAIFGLGTVGLAVAEGAKAVAKNFGVTEFINPKEHEKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKEICTQPFQLVTGRVWKGTAFGGFKSRSQVPWLVNKYLKKVKVLKF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0292 316 Pfam Zinc-binding dehydrogenase 201 271 IPR013149 -
Aed8g0292 316 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Aed8g0292 316 PANTHER ALCOHOL DEHYDROGENASE 4 312 - -
Aed8g0292 316 SUPERFAMILY GroES-like 4 198 IPR011032 -
Aed8g0292 316 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Aed8g0292 316 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 4 312 - -
Aed8g0292 316 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 308 IPR036291 -
Aed8g0292 316 Gene3D - 183 289 - -
Aed8g0292 316 Gene3D - 14 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0292 Aed-Chr8 2440746 2443762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0292 1 300 Monolignol Biosynthesis Gene Families AT1G72680 23.926 1.44e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0292 K00121 - gmx:100793008 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0292 8 2440746 2443762 Aed8g0292 8 2440746 2443762 ECH
Aed4g0108 4 766690 770007 Aed8g0292 8 2440746 2443762 PCT