Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0286 ATGCAGATGAAAACTCAGTTTTTCTTCTACTTCTGTTGTTGCATTTGCTGTTTCTCTTATGGTTTTGCAGATGAAAACAAAGAAAATGGTGAAGCATCTGCTTTACTTTCTATAAAAGAAGGCCTCATTGATCCACTGAATAGCCTGCATGATTGGAAATTGGTGGACAAAGCAGCTCATTGTAACTGGACTGGTGTGAAGTGCAACTCAGGTGGAGCCATAGAGAAGCTTGATCTCTCTCGCATGAATCTGAGTGGCATTGTGTCCAATGAGATACAAAGGCTGAAGAGTCTAACCTCTCTCAATTTGTGTTGCAATGAGTTTTCCTCATCATTGTCATCCATGGCCATAGCCAATCTCACCACACTGAAGAGCCTTGATGTGAGCCAGAATTTCTTCACTGGTGACTTTCCATTAGGCCTTGGAAATGCATCAGGACTGATGACATTAAATGCATCCAGCAACAATTTCTCCGGCTTTCTTCCTCAGGATCTTGGAAATGTCACTTCCTTGGAGACTTTGGATCTCAGAGGAAGCTTCTTTGAAGGGTCAATTCCAAAGTCCTTCAGTAAATTGCACAAGCTGAAGTTCCTTGGTTTATCTGGGAATAATCTCACCGGGGAAATCCCCGGAGAGCTGGGGCAGCTTTCGTCACTCGAATGCATGATCATTGGATACAATGGATTTGAAGGAGGGATTCCATCAGAGTTTGGAAATCTCACAAAGCTGAAGTATCTTGACATAGCAGAAGGCTTCCTTGGTGGTGAAATTCCAGCTGAGTTGGGAAAGCTCAAACTGTTGAACACAGTTTTCTTGTACAGAAACAAATTTGAAGGCAAGATTCCACTAGCAATTGGTAACATGAGTTCACTGGTGCAGCTGGATCTATCAGACAATATGTTATCAGGAAATATTCCAGCTGAAATAAGTCAGCTGAAGAATTTACAGCTTCTGAACTTCATGCGGAACCGGCTATCTGGTCCCGTTCCTTCTGGCCTTGGGGACTTGCCTAAACTTGAGGTGCTTGAGCTGTGGAACAATTCCTTGTCAGGGACATTGCCTAGAAACCTTGGCAAGAATTCACCATTGCAGTGGTTGGATGTATCATCCAATTTACTCTCTGGTGAGATTCCAGAAACTCTTTGCACCAAGGGCTATCTCACCAAGCTCATACTTTTCAACAATGCTTTCTTGGGTCCAATTCCAGCAAGCCTATCAACATGTCCTTCGCTTGTTCGTGTTCGAATTCAGAGCAATTTTCTTTCCGGGACAATCCCTGTTGGTCTTGGTAAGCTTGGGAAGCTTCAGAGGCTAGAATTGGCTAACAATAGTCTCAGTGGTGGAATTCCTGATGACATTGGTTCTTCTGCATCCCTTTCTTTCATTGATTTTTCAAGAAACAACCTCCACTCTTCTCTTCCTTCAACCATTATTTCCATTCCAAATCTGCAAACTTTAACTGTCTCCAACAACAACTTGAGAGGTGAAATCCCAGACCAGTTCCAGGATTGTCCCTCACTTGGTGTCCTTGATCTCTCGTCGAACCGATTCTCCGGAAGCATTCCAGCAAGCCTTGCATCATGTCAGAAACTGGTAAACTTGAACCTACAGAACAACCAATTGAGTGGTGGAATCCCAAAAGCATTGGCAAGCATGCCTACATTGGCCATTCTTGATCTTGCCAACAACACTCTTAGTGGTCATATACCTGAAAGCTTTGGCATGTCTCCAGCTCTAGAAACATTCAATGTCTCACACAACAAGCTAGAAGGCCATGTCCCGGAAAATGGCGTGCTAAGAACAATAAACCCAAATGATCTCGCGGGAAATGCTGGCTTATGTGGTGGTGTTCTTCCTCAGTGTGGCCAAACCTCAGCATATCCATTAAGGCATGGGAGCTCACGTGCAAAGCACATTCTTGTAGGATGGATCGTTGGAATATCATCGATACTAGCCATTGGGGTGGCAACTTTGGCAGCAAGATCTTTATACATAAAGTGGTACACCGATGGATTGTGCTTCCGAGAAAGGTTTTATAAGGGTAGGAAGGGGTGGCCTTGGAGATTGATGGCCTTCCAGAGGCTTGATTTTACAAGTAGTGACATTTTGTCTTGCATCAAGGATACAAATATGATTGGAATGGGAGCAACTGGGGTTGTTTACAAGGCTGAGATACCACAATCAAGCACAATCGTGGCTGTCAAAAAGTTGTGGAGATCATCAGGATCTGATATTGAAGTAGGAAGCAGTGATGACCTTGTTGGAGAGGTGAATCTCTTAGGGAGGCTAAGGCATAGGAACGTTGTTAGACTACTAGGATTTCTTTACAATGATGCTGATGTAATGATAGTTTATGAATATATGCACAATGGAAACCTTGGAGATGCCTTGCATGAATATGGATACTCCTTGAAAGTGGATGAAAAGATTGACATATACAGTTATGGAGTGGTTCTGTTGGAGCTTGTCACCGGAAAGCGACCTTTAGATCCTGAGTTTGGAGAATCTATAGACATAGTAGGGTGGATTAGAAGGAAGATAGACAACAAATCTCCAGAAGAAGCATTAGACCCCAGTGTAGGAGGAAACTGCAAGCATGTTCAAGAAGAGATGCTTTTTGTTCTCAGAATAGCACTTCTTTGCACTGCCAAGTTCCCCAAGGACAGACCCTCCATGAGGGATGTTATAATGATGCTTGGAGAGGCAAAGCCTCGGAGAAAGAGTGGTAGGAGCAGTGATACATTTTCAGCTAACAAGGAGATGCCAGCTATTAGCTCATCACCTGTTAATGGCCTTCTGTAG 2802 0.4354 MQMKTQFFFYFCCCICCFSYGFADENKENGEASALLSIKEGLIDPLNSLHDWKLVDKAAHCNWTGVKCNSGGAIEKLDLSRMNLSGIVSNEIQRLKSLTSLNLCCNEFSSSLSSMAIANLTTLKSLDVSQNFFTGDFPLGLGNASGLMTLNASSNNFSGFLPQDLGNVTSLETLDLRGSFFEGSIPKSFSKLHKLKFLGLSGNNLTGEIPGELGQLSSLECMIIGYNGFEGGIPSEFGNLTKLKYLDIAEGFLGGEIPAELGKLKLLNTVFLYRNKFEGKIPLAIGNMSSLVQLDLSDNMLSGNIPAEISQLKNLQLLNFMRNRLSGPVPSGLGDLPKLEVLELWNNSLSGTLPRNLGKNSPLQWLDVSSNLLSGEIPETLCTKGYLTKLILFNNAFLGPIPASLSTCPSLVRVRIQSNFLSGTIPVGLGKLGKLQRLELANNSLSGGIPDDIGSSASLSFIDFSRNNLHSSLPSTIISIPNLQTLTVSNNNLRGEIPDQFQDCPSLGVLDLSSNRFSGSIPASLASCQKLVNLNLQNNQLSGGIPKALASMPTLAILDLANNTLSGHIPESFGMSPALETFNVSHNKLEGHVPENGVLRTINPNDLAGNAGLCGGVLPQCGQTSAYPLRHGSSRAKHILVGWIVGISSILAIGVATLAARSLYIKWYTDGLCFRERFYKGRKGWPWRLMAFQRLDFTSSDILSCIKDTNMIGMGATGVVYKAEIPQSSTIVAVKKLWRSSGSDIEVGSSDDLVGEVNLLGRLRHRNVVRLLGFLYNDADVMIVYEYMHNGNLGDALHEYGYSLKVDEKIDIYSYGVVLLELVTGKRPLDPEFGESIDIVGWIRRKIDNKSPEEALDPSVGGNCKHVQEEMLFVLRIALLCTAKFPKDRPSMRDVIMMLGEAKPRRKSGRSSDTFSANKEMPAISSSPVNGLL 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0286 933 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Aed8g0286 933 Pfam Leucine rich repeat 481 541 IPR001611 GO:0005515
Aed8g0286 933 Gene3D Ribonuclease Inhibitor 384 625 IPR032675 -
Aed8g0286 933 Pfam Protein kinase domain 708 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0286 933 Gene3D Ribonuclease Inhibitor 178 281 IPR032675 -
Aed8g0286 933 SUPERFAMILY Protein kinase-like (PK-like) 704 900 IPR011009 -
Aed8g0286 933 ProSiteProfiles Protein kinase domain profile. 706 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0286 933 PANTHER UNNAMED PRODUCT 5 798 - -
Aed8g0286 933 Pfam Leucine Rich Repeat 170 192 IPR001611 GO:0005515
Aed8g0286 933 Gene3D Ribonuclease Inhibitor 282 383 IPR032675 -
Aed8g0286 933 MobiDBLite consensus disorder prediction 903 933 - -
Aed8g0286 933 Gene3D Phosphorylase Kinase; domain 1 696 784 - -
Aed8g0286 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 798 - -
Aed8g0286 933 Gene3D Ribonuclease Inhibitor 28 177 IPR032675 -
Aed8g0286 933 PANTHER UNNAMED PRODUCT 799 915 - -
Aed8g0286 933 Gene3D Transferase(Phosphotransferase) domain 1 785 916 - -
Aed8g0286 933 SUPERFAMILY RNI-like 150 576 - -
Aed8g0286 933 ProSitePatterns Protein kinases ATP-binding region signature. 712 736 IPR017441 GO:0005524
Aed8g0286 933 SMART LRR_typ_2 95 119 IPR003591 -
Aed8g0286 933 SMART LRR_typ_2 432 456 IPR003591 -
Aed8g0286 933 SMART LRR_typ_2 288 312 IPR003591 -
Aed8g0286 933 SMART LRR_typ_2 336 360 IPR003591 -
Aed8g0286 933 SMART LRR_typ_2 192 216 IPR003591 -
Aed8g0286 933 SMART LRR_typ_2 480 503 IPR003591 -
Aed8g0286 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 799 915 - -
Aed8g0286 933 MobiDBLite consensus disorder prediction 914 933 - -
Aed8g0286 933 SUPERFAMILY L domain-like 74 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0286 Aed-Chr8 2399417 2402916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0286 750 933 Receptor kinase-like Gene Family AT1G08590 52.432 6.08e-47 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed8g0286 Pkinase 1.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0286 - - gmx:100788430 1430.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0286 8 2399417 2402916 Aed8g0286 8 2399417 2402916 ECH