Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0285 ATGTCAACTGTGTCCAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCGTGCCCAGAAGAGTCTGAGCTTGAATTGGGTCTTGGCTTGAGTCTCTCTTCATCAAACTCTCATCATCACCACCATCATCATACTCCTTATGCTAGAATTTACACTGCTAAGGATTTTCCTTCTTCGGCAGCATCACCTTCCTCTTCTTCCTCTTCCTCTCCCAACAACATCACTGCTGGCACCAAGAGACCTGCTTCTGATTCTCTTGCTGCTGCCAATAACCGTCCCAGTCAAGTAGTTGGATGGCCTCCACTTCGAACATATAGAGTGAATAGCTTCAATAGCCATGCAAAATCAACTGAAGTATTCAACTCTGCTGTGGCTGAGAAGAGTAAGACCAATAATGTTGTGGTAAGGAAGAGTGCTGACAATGGCAATGATAATAACACAAATGCCAAAGAAAAAAGACACCTCAGGAGTTCCCTGTTCGTCAAGGTAAATATGGATGGGATACCAATCGGAAGGAAGGTTGATTTGAGCGCTCATAGTTCCTATGAAACCTTAGCACAGACATTGGAGGATATGTTTTATGAATCAACTACAGTCACCACTTGCAAAGGATCAAATGGTGAGGATCTTGGCATTATTATCGGAGGAGAAAGGCATTCAAAATTGTTGGATGGATCTTCCAAGTTTGTGCTCACTTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTGCCATGGGGGATGTTCCTTAGCTCGGCAAGGAGGCTAAGAATCATGAGGACATCCGAGGCTAACGGACTTGCACCAAGATTGGAAGAAAATATCAAACAGAGATGCAAGCCCATATAG 858 0.4406 MSTVSKDDNLVLSSEDSSCPEESELELGLGLSLSSSNSHHHHHHHTPYARIYTAKDFPSSAASPSSSSSSSPNNITAGTKRPASDSLAAANNRPSQVVGWPPLRTYRVNSFNSHAKSTEVFNSAVAEKSKTNNVVVRKSADNGNDNNTNAKEKRHLRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFYESTTVTTCKGSNGEDLGIIIGGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSARRLRIMRTSEANGLAPRLEENIKQRCKPI 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0285 285 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 276 IPR003311 GO:0005634|GO:0006355
Aed8g0285 285 MobiDBLite consensus disorder prediction 1 100 - -
Aed8g0285 285 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 8 276 - -
Aed8g0285 285 SUPERFAMILY CAD & PB1 domains 154 262 - -
Aed8g0285 285 ProSiteProfiles PB1 domain profile. 159 266 IPR000270 GO:0005515
Aed8g0285 285 MobiDBLite consensus disorder prediction 1 18 - -
Aed8g0285 285 MobiDBLite consensus disorder prediction 58 93 - -
Aed8g0285 285 Pfam AUX/IAA family 50 273 IPR033389 -
Aed8g0285 285 Gene3D - 154 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0285 Aed-Chr8 2394373 2399033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0285 152 273 B3 DNA Binding Superfamily AT1G59750 32.787 9.76e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aed8g0285 AUX_IAA 2.8e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0285 K14484 - gmx:100779400 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0285 8 2394373 2399033 Aed8g0285 8 2394373 2399033 ECH