Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0276 ATGAAAGGCGTGTTCTTAATTTCTTCCTGTGTTTTGAATATTAAGATGGCTGGGGATATCAAGGAGGGGAGATCTCTGGCAAAAGGGTATTCAGTTATTTTACTGCTATTGACTTTACTTCTTTTTTCTAGCACTGAGGGGTTGAACACTGAGGGGGAAATCCTCCTAGAGCTGAAGAATGGACTTCATGATAAATCCAATGTTCTGGGAAATTGGAGGTCTATTGATGAAACCCCATGTGGATGGATAGGTGTAAATTGCACTCATGATATTAATAACAATTCTGTGGTTGTGTCTCTTAATTTGAGTTCAATGAATCTTTCTGGAGCTCTAAATGCTGCTGGCATTAGGGGTCTGACCCATCTAACTCATCTCAATCTTGCTTACAATTATCTGACTGGAAACATCCCCAAGGAGATTGGTGAGTGCTTGAATTTGGAATATCTTTATTTGAACAATAACCAGTTTGAGGGGAAAATTCCTGCTGAATTGGGCAAGCTGTCTGTTTTGAAAAGTTTGAACATTTTCAACAACAAACTCTCTGGGGTGATTCCAGATGAGTTTGGGAACTTGTCTTCATTGGTTGAGTTAGTGGCCTTTAGCAACTTTCTCGTTGGACCCCTTCCAAATTCAATTGGGAATCTTAAGAAGCTTGAAAATTTCAGAGCTGGGGCAAATAACATCACCGGTAACTTGCCAAAAGAGATTGGTGGATGCACAAGCTTAATACGTCTTGGTCTTGCACAAAATCAGATAGGAGGGGAGTTACCAAGGGAGATTGGGATGCTTTCAAGATTGAAAGAACTGGTTTTGTGGGGAAACCAGTTGTCAGGAGCTATTCCTAAAGAGATTGGGAATTGCACCAGTCTTGAGAACATTGCTATGTATGGGAATATTTTTGTTGGACAAATACCTAAGGAAATTGGGAACCTCAAATCGTTGAGGTGGCTCTATGTTTACAGAAACAAGTTGAATGGAACCATTCCAAAGGAGATTGGAAACCTTTCTTCATGTTTGGATATTGATTTCTCAGAGAACTCTTTAGTAGGTGAAATCCCCTCAGAGTTTGGCAAAATAAGTGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCACTTAACTGGTGTTATACCAAATGAGTTTAGTAGCTTGAAGAATCTCTCAAAGCTGGACCTGTCAATAAACAATCTCACAGGTTCAATTCCATTTGGCTTCCAATATTTGCCTAAAATGTTTCAGTTGCAGCTCTTTGACAACTCCTTGAGTGGTGTTATTCCTCAGGGACTAGGCCTTCGTAGTCCTCTTTGGGTGGTTGATTTTTCTGACAACAAATTGACAGGAAGAATACCTCCTCATCTATGCCGAAACTCTCGGTTGATGTTGTTGAATCTGGCCTCTAATCACCTCAATGGAAACATACCAACAGGGATACTAAACTGTAAATCATTGGCACAGTTGTTGTTATTTGAAAACAAGCTTACTGGCAGCTTTCCTTCTGAATTGTGTAGGCTGGAGAACTTGACTGCCATTGATTTGAATGAGAACAGGTTCAGTGGTACACTCCCTGACGAGATTGGTGGCTGCCACAAACTGCAAAGGCTTCATATTGCCAACAATTACTTCACATTGGAGTTGCCTAAGGAAATTGGAAATCTCTCTCAACTAGTGACCTTCAATGTTTCATCAAATCTTTTCACTGGAAGAATCCCACCTGAGATTTTTTCATGTCAACGGCTACAGCGGCTCGATCTCAGCCAGAATAACCTTTCCGGTTCCTTGCCAGATGAGGTTGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATAAGCTGTCTGGAAATATTCCTGCAGCATTAGGCGATCTTTCTCATTTGAACTGGTTGTTGATGGATGGCAATAGTTTCTTTGGCGAAATCCCTCCCCATTTAGGTTCTCTTTCAACCTTGCAAATTGCAATGGATCTCAGTTTCAATAGCCTCTCTGGAAGAATACCGGTTCAGCTTGGCAAACTCAACATGCTTGAATATCTCTATCTCAATAACAACCATTTGGATGGTGAAATTCCAAGCGCATTTGAAGACCTTTCAAGCTTGTTGGGGTGCAATTTTTCATACAACAACCTCTCTGGACCTATTCCTTCCACTAAAATCTTCCAAAATATGCTTCTAAGCAGCTTCATTGGTGGTAACAACAGCCTCTGTGGTGCACCTCTCGGTGACTGCAGCGATCTAGCCTCTCGCACTGATACTCGTGGGAAGAGTTTTGACTCTCCTCGCGCTAAATTAGTCATGATCATTGCAGCTTCTGTTGGAGGTGTTGCACTCATTTTCATTTTGGTTATTTTGTATTTTATGAGACGTCGTCCTCAGGAGTCGTTTGATTCCTTTGAAGGCACTGAGCCTCCCTCCCCAGATTCAGATATCTATTTCCCTCCAAAGGAAGGTTTCACTTTCCATGATCTAGTTGAAGCCACAAAAAGATTTCATGAAAGCTATGTTATTGGTAAGGGAGCATGTGGAACAGTTTATAAGGCAGTGATGAAATCTGGCAAGACCATTGCAGTTAAGAAGTTAGCATCTAACAGAGAAGGGAACAACATTGAGAATAGTTTCAGGGCTGAAATATCTACTCTGGGAAGGATAAGGCATAGGAACATAGTGAAACTCTATGGATTTTGCTATCAGCAGGGTTCCAATCTCCTGCTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAACAATTGCATGGCAATGCAAGTAATTTGGAGTGGCCAACTCGGTTCATGATTGCTCTTGGAGCTGCTGAGGGCCTTGCCTACTTGCATCATGACTGCAAACCAAAGATTATTCACCGCGATATCAAATCTAACAACATTCTGCTGGATGAAAATTTTGAGGCTCATGTTGGTGATTTTGGTCTGGCAAAAGTCATTGACATGCCCCAGTCAAAATCAATGTCTGCTGTTGCTGGTTCTTATGGCTATATTGCTCCTGAATATGCATATACCATGAAGGTGACAGAGAAGTGTGACATTTACAGCTATGGTGTTGTGCTCTTGGAACTGCTAACTGGAAGAACTCCAGTTCAGCCAATAGAGCAAGGAGGTGATCTTGTCACATGGGTGAGGAACCATATCCGGGACCACAATAACACATTGACACCGGAGATACTCGACACTCGTGTCGATCTGGAAGACCAAACCACCACTGTGAATCACATGATCACTGTCTTGAAGCTTGCTTTACTGTGCACAAGTGTGTCTCCTAACAAGAGGCCATCAATGAGGGAAGTTGTGTTGATGCTAATCGAGTCGAACGAGCGAGAAGGAAACTTGACACTCACTCAAACGTACCATGATCTTCCTTCCAAAGATGCCTTGTGA 3387 0.4195 MKGVFLISSCVLNIKMAGDIKEGRSLAKGYSVILLLLTLLLFSSTEGLNTEGEILLELKNGLHDKSNVLGNWRSIDETPCGWIGVNCTHDINNNSVVVSLNLSSMNLSGALNAAGIRGLTHLTHLNLAYNYLTGNIPKEIGECLNLEYLYLNNNQFEGKIPAELGKLSVLKSLNIFNNKLSGVIPDEFGNLSSLVELVAFSNFLVGPLPNSIGNLKKLENFRAGANNITGNLPKEIGGCTSLIRLGLAQNQIGGELPREIGMLSRLKELVLWGNQLSGAIPKEIGNCTSLENIAMYGNIFVGQIPKEIGNLKSLRWLYVYRNKLNGTIPKEIGNLSSCLDIDFSENSLVGEIPSEFGKISGLSLLFLFENHLTGVIPNEFSSLKNLSKLDLSINNLTGSIPFGFQYLPKMFQLQLFDNSLSGVIPQGLGLRSPLWVVDFSDNKLTGRIPPHLCRNSRLMLLNLASNHLNGNIPTGILNCKSLAQLLLFENKLTGSFPSELCRLENLTAIDLNENRFSGTLPDEIGGCHKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPPEIFSCQRLQRLDLSQNNLSGSLPDEVGTLQHLEILKLSDNKLSGNIPAALGDLSHLNWLLMDGNSFFGEIPPHLGSLSTLQIAMDLSFNSLSGRIPVQLGKLNMLEYLYLNNNHLDGEIPSAFEDLSSLLGCNFSYNNLSGPIPSTKIFQNMLLSSFIGGNNSLCGAPLGDCSDLASRTDTRGKSFDSPRAKLVMIIAASVGGVALIFILVILYFMRRRPQESFDSFEGTEPPSPDSDIYFPPKEGFTFHDLVEATKRFHESYVIGKGACGTVYKAVMKSGKTIAVKKLASNREGNNIENSFRAEISTLGRIRHRNIVKLYGFCYQQGSNLLLYEYMERGSLGEQLHGNASNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPIEQGGDLVTWVRNHIRDHNNTLTPEILDTRVDLEDQTTTVNHMITVLKLALLCTSVSPNKRPSMREVVLMLIESNEREGNLTLTQTYHDLPSKDAL 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0276 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 950 962 IPR008271 GO:0004672|GO:0006468
Aed8g0276 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 18 1114 - -
Aed8g0276 1128 Pfam Leucine rich repeat 577 635 IPR001611 GO:0005515
Aed8g0276 1128 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
Aed8g0276 1128 SMART LRR_typ_2 672 695 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 311 335 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 167 190 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 119 143 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 383 406 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 599 623 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 503 527 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 263 287 IPR003591 -
Aed8g0276 1128 SMART LRR_typ_2 551 575 IPR003591 -
Aed8g0276 1128 ProSiteProfiles Protein kinase domain profile. 829 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0276 1128 SUPERFAMILY L domain-like 68 421 - -
Aed8g0276 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1114 - -
Aed8g0276 1128 Gene3D Phosphorylase Kinase; domain 1 804 906 - -
Aed8g0276 1128 SUPERFAMILY RNI-like 340 717 - -
Aed8g0276 1128 Pfam Protein kinase domain 830 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0276 1128 Gene3D Transferase(Phosphotransferase) domain 1 907 1121 - -
Aed8g0276 1128 SUPERFAMILY Protein kinase-like (PK-like) 806 1103 IPR011009 -
Aed8g0276 1128 Gene3D Ribonuclease Inhibitor 304 409 IPR032675 -
Aed8g0276 1128 Gene3D Ribonuclease Inhibitor 203 303 IPR032675 -
Aed8g0276 1128 Gene3D Ribonuclease Inhibitor 410 746 IPR032675 -
Aed8g0276 1128 Gene3D Ribonuclease Inhibitor 47 202 IPR032675 -
Aed8g0276 1128 SMART serkin_6 829 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0276 1128 Pfam Leucine Rich Repeat 675 695 IPR001611 GO:0005515
Aed8g0276 1128 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0276 Aed-Chr8 2341517 2347433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0276 48 1105 Receptor kinase-like Gene Family AT4G26540 38.504 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed8g0276 Pkinase 4.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0276 - - gmx:100805792 1971.05