Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0243 ATGTCGCTTCCAGCGTGTTCCGCGGCCCAACTGGCCCAACTCCTCGGCCCAAACACCACAGACGCCTCCGCCGCCGCCTCCCTCATCTGCGAGCAGTTCTCCGGCGTGTCAAACAACTTCACCAACGTGTCAAACAAGTTCTCCGACATGTCCTTCGCGGTCGACAGCACCTATCTCCTCTTCTCAGCCTACCTCGTGTTCTCGATGCAGCTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGAGGCCTCTTCTACTACCTCTTTGGCTTCGCCTTCGCCTTCGGCTCCCCCTCCAACGGCTTCATAGGCAAACACTTCTTCGGCCTCAAGGACCTCCCCTCCTCCTCCTTCGACTACAGTAACTTCCTCTACCAATGGGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCCGAACGAACACAGTTCGTCGCGTATCTCATCTACTCATCATTCCTCACCGGCTTCGTCTACCCGGTTGTCTCCCACTGGTTCTGGTCCCCCGACGGCTGGGCCTCCGCCTTCAAATCCAGCGACCGGCTATTCTCCACCGGCGTAATAGACTTCGCCGGATCCGGCGTAGTCCATATGGTCGGCGGAGTAGCCGGCCTCTGGGGCGCGTTGATCGAAGGCCCGAGAATCGGACGCTTCGATCACGCGGGACGTGCCGTGTCCCTACGCGGCCACAGCGCATCCCTAGTAGTCCTCGGGACCTTCATGCTTTGGTTCGGATGGTACGGCTTCAACCCCGGATCCTTCAATAAAATCTCAGTCACCTACGATGGTAAGTCAGGAGATTACTACGGTCAATGGAGCGCGGTTGGGAGAACCGCGGTAACCACAACCTTAGCCGGGTCAACGGCGGCGTTGACAACTCTCTTCGGGAAACGCGTGTTATCCGGTCACTGGAACGTGACGGACGTCTGCAACGGTCTGTTAGGCGGCTTCGCCGCCATAACAGCCGGTTGTTCCGTGGTGGAGCCGTGGGCGGCAATCGTGTGCGGATTCGTTGCTTCCATAGTTTTGATTTCATGCAACAAACTAGCAGAGAAGGTTAGATTCGACGATCCTCTTGAAGCAGCGCAGTTACACGGCGGTTGCGGCGCGTGGGGTGTGATATTCACGGCGCTGTTTGCGAAGAAGGAATACGTGAACCAGGTTTACGGTCCCGGAAGGTCGCACGGGTTGTTCATGGGTGGTGGAGGAAAGTTGTTGGGGGCGCACGTGATTCAGATTCTGGTTATTATTGGGTGGGTTAGTGCGACCATGGGACCCTTGTTTTGGGCTTTGAATAAATTAAAGCTGTTGAGGATTTCTTCGGAGGATGAGCTCGCGGGTATGGATATGACCCGACACGGAGGGTTTGCTTATGCTTATGAGGACGATGAGTCGCAGAAGCACGGGATTAAATTGAGGAAGGTCGAGCCCAACGCGTCGTCCACACCCACCACTGATTAA 1524 0.5755 MSLPACSAAQLAQLLGPNTTDASAAASLICEQFSGVSNNFTNVSNKFSDMSFAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLKDLPSSSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPDGWASAFKSSDRLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVSLRGHSASLVVLGTFMLWFGWYGFNPGSFNKISVTYDGKSGDYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRVLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASIVLISCNKLAEKVRFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVNQVYGPGRSHGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFWALNKLKLLRISSEDELAGMDMTRHGGFAYAYEDDESQKHGIKLRKVEPNASSTPTTD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0243 507 ProSitePatterns Ammonium transporters signature. 210 235 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed8g0243 507 PANTHER AMMONIUM TRANSPORTER 5 501 - -
Aed8g0243 507 SUPERFAMILY Ammonium transporter 54 460 - -
Aed8g0243 507 TIGRFAM amt: ammonium transporter 55 479 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed8g0243 507 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 501 - -
Aed8g0243 507 Pfam Ammonium Transporter Family 58 479 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed8g0243 507 Gene3D Ammonium transporter AmtB like domains 30 498 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0243 Aed-Chr8 2043565 2045088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0243 5 505 Inorganic Solute Cotransporters AT4G13510 79.608 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0243 K03320 - gmx:100796502 883.634