Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0231 ATGTCGAAGCGAGGACGTGGTGGTTCTGCTGGTAACAAGTTCAGGATGTCACTGTGTTTGCCGGTGGCAGCTGTGGTGAACTGTGCCGACAACAGATTACTATCTGCTTGTGTTGGTGATATGGTCATGGCTACTTGTAAGCTGTGGCGAGGAAAAGGAGACGGCGTCTACAAGTTCTGCCATATTTGGGGAAGGAGTGTTGCTGATCTGTGGCCCAGAATTGCAAGTGCTGCCAGAAACAACTCATTGGTACATTATGAGGATTAA 267 0.4869 MSKRGRGGSAGNKFRMSLCLPVAAVVNCADNRLLSACVGDMVMATCKLWRGKGDGVYKFCHIWGRSVADLWPRIASAARNNSLVHYED 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0231 88 PANTHER 60S RIBOSOMAL PROTEIN L23 31 52 - -
Aed8g0231 88 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 31 52 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aed8g0231 88 PANTHER 60S RIBOSOMAL PROTEIN L23 1 31 - -
Aed8g0231 88 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 31 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0231 Aed-Chr8 1954439 1957576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0231 1 78 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 43.066 7.10e-22 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0231 K02894 - mus:103980731 83.9593