Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0228 ATGGCTGCTTCAACAATGGGTCTCTCTTCTCCATCATTGGCTGGCCAAGCAATCAAGCTTGCCCCCTCTACCCCAGAGCTTGGCAATGGAAGGGTTTCCATGAGGAAAACCGTCACCAAGACGGTTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCATCATACCTCACCGGTGAATTCCCAGGTGACTATGGCTGGGACACTGCTGGGCTTTCTGCCGACCCAGAGACTTTTTCCAAAAACCGTGAACTCGAAGTCATCCACTCTAGATGGGCCATGTTGGGAGCCTTGGGCTGCGTGTTTCCTGAGCTCTTGTCCCGCAACGGTGTCAAGTTTGGCGAGGCTGTTTGGTTCAAGGCTGGGTCTCAAATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACTCAAGCCTGGTCCATGCACAAAGCATCCTTGCTATCTGGGCCACCCAAGTTGTCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTCGGTGAGGTGACTGACCCAATCTACCCAGGTGGTAGCTTTGACCCATTGGGCCTTGCTGAAGACCCCGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGCTCAAGAATGGTAGGTTGGCCATGTTTTCTATGTTTGGTTTCTTTGTTCAAGCTATTGTCACCGGAAAAGGGCCATTGGAAAATCTAGCTGATCATCTTGCCGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTACCCCCGGCAAGTGA 792 0.5278 MAASTMGLSSPSLAGQAIKLAPSTPELGNGRVSMRKTVTKTVSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFTPGK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0228 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Aed8g0228 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Aed8g0228 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
Aed8g0228 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 263 IPR001344 GO:0009765|GO:0016020
Aed8g0228 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0228 Aed-Chr8 1944870 1945661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0228 1 263 Chloroplast and Mitochondria Gene Families AT1G29930 86.891 3.05e-170 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0228 K08912 - ccaj:109815895 519.235