Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0227 ATGTTAGGTTTTTTGGGCCAGAGTTGGGTCCAAATACAAAGCCCTCGGAGCATAACCTCATTCATTCGTGTTTGTGTTATTGGAAGAAAGATATTGAGACAGAGAGAGATGGCAACAGCAAGTGAAGAAGTGGTTGCGGCGGAGCCGGCACCCGCCCCCGCACCGTCACCGGCACCGGAGGCAGGGTTGAAGCACAAACTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAACAGGGCGCTGCTTGGGGAACCTCTCTTCGCAAAGTCTACACCTTCGACACCGTTGAAGAGTTCTGGTGTTTGTATGTTCAGGTATTCCAGCCCAGCAAGTTGCAAAACAATGCTGATTTTCACTTGTTCAAGACTGGGATTGAGCCAAAGTGGGAAGATCCCGAGTGTGCCAATGGAGGAAAATGGACTGTCACCAGCAACAAGAAGGCCAACCTTGATAGCATGTGGCTTGAAACTATGATGGCTTTGATTGGGGAGCAATTTGAGGATGCTGAGGACGTATGCGGTGTGGTTGCAAGTGTGCGCCAGTGGCAGGACAAGCTTTCATTGTGGACAAAGACAGCGGCAAATGAGTCTGCCCAGACAAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTCAACGACAAGATAACATACAACTTTCATGTTCTGTCTGGTCGCGACGGTAACATTTCACTGCTTAACCTCAGTTTATTGGCCTTAGCTCCAATAGGATCCGAACTCCTCAATATGGTCACGGAATATGCTGTGTTGCACAATGTCCAAGAGTTGTTTATAAGAGCACGTTTAACCTCTAGAAACATTTCTCCCATTTTTTCCTGTCAGTCTTTGACATTTCTTGAGCTTTGCAATCATTCTTCCTACCCTCCTTTGGAACTTCCAGAATCTCTGCTGTTACCAGCTTTAGAAAGCTTGCATCTCTCTGTTTTCACTTTTACAGCAAGTGACAATGGCTGCGCGGAGCCCTTTTCAACTTGTAAATTGTTGAAAACTTTGGACCTTAAACGATGCTCTTTGCACAATGATGCAGAAGCACTCTTCGTATCTAATTCTAACCTTCGGATTTTAAAGCTTGTCAATAGCTTTGAAGCTACCTCCGAAGATCCGAACAAAATTGTGCTTTCTACTCCAAATCTTAGATATCTCACAATTGATTCATCAGATTTCAATTATCAACCAATTTCCTCGACATGTAATCTCCCATGTCTTAAAGAAGCAACTATTCACACCACTATTCTTAGATCTTTCCTAGACTGGCTGCAACTCCTCGCTAATGTAGAGATATTGACACTTTCTTATGATACCCTCATGCTAATGCTAAAAGATCTATCAAATCTCACTGCAACAAGAGCTCAACTTCCGTGCTTTGTTAGATTGGAGGGAATTGACGTGACAACAACTCCACCTCATAAAATCTTTCTTCGATCAGTATCAATGGAAGAAGAAGAAGGAAAAGAAATTAAGAAGACGAAGAAGGAACACGATACAAGTGGAACAAGGGACACGTTGAGTGAGTTGCCTGACACTGTTCTGTTTCATATAATGAAATTTATGGACACAAGATACGCTGTTCAGACTTGTATCTTGTCCAAACGATGGAAGAGCCTTTGGAAAAGTCTCACTAGTCTATTTTTCTTTCACTCTGGCTCTTGCTTTGACTTTAGAAGGCATGCCAATTTCAACAAGTTTGTATCTCAGGTTCTATCTGGTAGAGATGGTTCCATTTCACTGCTTAACCTTGGTTTATTGTCCTACCATCCAATAGGGTCCGAACGCCTCAATAGGGTCATGGAATATGCTGTGTTGCACAATGTTCAACACTTGACTATCCAAATACCTTTCAACTTTGGAAACATACCAGTTTCTTTTGACCCTCTCATTTTTTCCTGTCAGTCTTTGACATTTCTTAAGCTTTTGAATTCATCTTCGGGCCCTCCTTTGGAACTTCCAAAATCTCTGCGGTTACCAGCGTTAAAAAGCTTGCATCTCATTAATGTCAGTTTCACTGCAAGTGGCAATGGCTGCGCGGAGCCCTTCTGA 2070 0.4319 MLGFLGQSWVQIQSPRSITSFIRVCVIGRKILRQREMATASEEVVAAEPAPAPAPSPAPEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYVQVFQPSKLQNNADFHLFKTGIEPKWEDPECANGGKWTVTSNKKANLDSMWLETMMALIGEQFEDAEDVCGVVASVRQWQDKLSLWTKTAANESAQTSIGRKWKEIIDVNDKITYNFHVLSGRDGNISLLNLSLLALAPIGSELLNMVTEYAVLHNVQELFIRARLTSRNISPIFSCQSLTFLELCNHSSYPPLELPESLLLPALESLHLSVFTFTASDNGCAEPFSTCKLLKTLDLKRCSLHNDAEALFVSNSNLRILKLVNSFEATSEDPNKIVLSTPNLRYLTIDSSDFNYQPISSTCNLPCLKEATIHTTILRSFLDWLQLLANVEILTLSYDTLMLMLKDLSNLTATRAQLPCFVRLEGIDVTTTPPHKIFLRSVSMEEEEGKEIKKTKKEHDTSGTRDTLSELPDTVLFHIMKFMDTRYAVQTCILSKRWKSLWKSLTSLFFFHSGSCFDFRRHANFNKFVSQVLSGRDGSISLLNLGLLSYHPIGSERLNRVMEYAVLHNVQHLTIQIPFNFGNIPVSFDPLIFSCQSLTFLKLLNSSSGPPLELPKSLRLPALKSLHLINVSFTASGNGCAEPF 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0227 689 Gene3D RNA Cap, Translation Initiation Factor Eif4e 59 232 IPR023398 -
Aed8g0227 689 SUPERFAMILY L domain-like 258 456 - -
Aed8g0227 689 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 225 488 - -
Aed8g0227 689 Pfam F-box domain 513 550 IPR001810 GO:0005515
Aed8g0227 689 Gene3D Ribonuclease Inhibitor 233 487 IPR032675 -
Aed8g0227 689 PANTHER CYCLIN-LIKE F-BOX 225 488 - -
Aed8g0227 689 Gene3D - 494 553 - -
Aed8g0227 689 Pfam Eukaryotic initiation factor 4E 67 221 IPR001040 GO:0003723|GO:0003743|GO:0006413
Aed8g0227 689 PANTHER CYCLIN-LIKE F-BOX 503 689 - -
Aed8g0227 689 SUPERFAMILY eIF4e-like 50 226 IPR023398 -
Aed8g0227 689 ProSitePatterns Eukaryotic initiation factor 4E signature. 121 144 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Aed8g0227 689 ProSiteProfiles F-box domain profile. 510 558 IPR001810 GO:0005515
Aed8g0227 689 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 503 689 - -
Aed8g0227 689 SMART fbox_2 516 556 IPR001810 GO:0005515
Aed8g0227 689 SUPERFAMILY F-box domain 510 563 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0227 Aed-Chr8 1934937 1942560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0227 48 230 Eukaryotic Initiation Factors Gene Family AT5G35620 66.489 3.81e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0227 K03259 - gmx:100499799 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0227 8 1934937 1942560 Aed8g0227 8 1934937 1942560 ECH