Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0213 ATGTTCAAGGCTGTGTCATTTGAAGTGTTGTTGATTTGCTTGGTAGTTTTCACATGTGTAACTGCAACAACAGATAATGGTTTTCCAAGATGCAACTGTGATGATGAGTCCAGCTTGTGGACTATTGAGACAATTCTGGAGTGCCAGAGAATTGGTGATTTTCTGATTGCTGTGGCCTACTTCTCCATCCCTGTTGAGCTACTTTACTTTATTAGTTGCTCAAACTTCCCATTCAAATGGGTCCTCTTTCAGTTCATTGCTTTCATTGTACTTTGTGGAATGACACATTTGTTGAATGGGTGGACTTATGGTCCCCACACTTTCCAACTCGTGGTGGCGGTTACTGTCTTCAAAATACTCACTGCCTTGGTGTCATGTGGCACCGCCATAACCCTCCTCACCTTCATCCCTATGCTGCTCAAAGTTAAGGTTAGAGAGTTGATGCTCAAGAAAAAGACATGGGATCTAGCCTCGGAGGTTGGGATCATAATGAGACAGAAGGAGGCTGCAATGCATGTGAGGATGCTCACTCAAGAGATTCGGAAATCCTTGGATAGGCATAAGATTCTCTACACCACCTTGGTTGAGCTTTCTAAGACACTTGGTTTGCACAACTGTGCGGTGTGGATGCCAAATGTTGAAAAGACTCAGATGAACCTCACACATGAGTTGAATGGGAGGAATGTTAATTGTTCTTTACCAATAAGTAATCCGGATGTTTTGAGAATTAAGGGAAGCGATGAGGTAAGCATAATTGATTCTGACTCGGTACTCGCCACTGCCAGCAGTGGAGTTTCTGGCGAGGTGGGACCAGTTGCTGCAATCCGAATGCCAATGCTTCGTGTTTGCAATTTCAAAGGGGGGACGCCGGAGCTGAGGCAGACGTGCTATGCCGTGTTGGTTTTGATTCTCCCGAGCATGGAGCATAGACCGTGGAGCTTTCAAGAGCTGGAGATCATTAAGGTGGTTGCTGATCAGGTGGCCGTGGCTCTGTCACACGCCTCGATTCTGGAAGAGTCTCAGCTCATGAGGGAGAAGCTGGAGGACCAGAACCGCGCCTTGCAGGTGGAGAAGATGAATGCCATGATGGCGACCCAAGCGAGAGCCGCGTTTCAAAAGGTCATGAGCAATGGAATGAGAAGGCCTATGCACTCGATTTTGGGGCTGCTTTCGATGATGCAAGAGGAGAACTTGAAGAGCGAGCAGAAACTTGCTGTGAATTCAATGCTGAGGTCCAGCAGTGTCTTGTCAAACTTGATAAACGATGCAATGGACCATTCGGCAAGGGATGATGGGAGATTCCCTTTGGAGATGAAACCTTTCGGATTGCATGCTATGGTGAAAGAGACAGCATGTCTTGCCAGGTGCATGTGCATCTATAGGGGATTTGGCTTCATGGTTGATGTTGACAAGTCTCTGCCGGACAACCTTATAGGCGACGAAAAGAGGGTTTTTCAGGTGATTATGCATATGGTTGGGAATGTGATAAATGGTAACCATGGAGGTGTTCTTGTGTTTCGGGTTTTCGCAGAAACTGGAAGCCAAGGAAGGAATAATGACCAGGGATGGACTAACTGGAGACCAAGCTCTTCTAGCGGGGATGTAAATATTAGATTTGAGGTAGGGATCAATTCTGGTGATCCAGAATCGAGTTCGGTTCCTTCGGGGCAGCTTGCAGGTACAAAGCATGCCGGTGATAGGGTTGAGGACAACAGATTGAGCTTCAGCATTTGCAAGAGGATAATCCAGCAGTTGATGCAAGGGAACATATGGTTTGTACCAAATGCTCAAGGTTTTCCTCAAGTCATGTCGCTTTTTCTCCGGTTCCAACTGCAGCAATCTATCGCCTTGTCCATCTCTGAACCTGGGGAGAGTTCCGAGCCATCCAGTTCAAATTCATTCTTCAGAGGTCTGCAGGTCTTGTTGGCCGACAACGACAGCATAAATAGAGCAGTGACACAGAAGTTGCTTCAGAAACTAGGCTGTGTTGTGACCTCTGTCTCTTCAGGATTTGAATGCCTCAGTGTTGTTGGACCTGCTGGATCCTCCTTTCAAGTTATTCTTTTGGATCTTCACATGCCTGAGCTCGATGGATTTGAAGTTGCGACGAGGATTCGCAAGTTTAGAAGCCAGGATTGGCCTGTGATTGTTGCCTTGACTGCAAGCACAGAGGATTTGAGGGAAAGATGCATGCAGATTGGCATGAATGGAGTCATAAGGAAGCCAGTTTTGTTGCATGGAATTGCTAGTGAACTCAGAAGAATCCTATTGCAGGGAAACAGTGCCATGTGA 2292 0.4668 MFKAVSFEVLLICLVVFTCVTATTDNGFPRCNCDDESSLWTIETILECQRIGDFLIAVAYFSIPVELLYFISCSNFPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHTFQLVVAVTVFKILTALVSCGTAITLLTFIPMLLKVKVRELMLKKKTWDLASEVGIIMRQKEAAMHVRMLTQEIRKSLDRHKILYTTLVELSKTLGLHNCAVWMPNVEKTQMNLTHELNGRNVNCSLPISNPDVLRIKGSDEVSIIDSDSVLATASSGVSGEVGPVAAIRMPMLRVCNFKGGTPELRQTCYAVLVLILPSMEHRPWSFQELEIIKVVADQVAVALSHASILEESQLMREKLEDQNRALQVEKMNAMMATQARAAFQKVMSNGMRRPMHSILGLLSMMQEENLKSEQKLAVNSMLRSSSVLSNLINDAMDHSARDDGRFPLEMKPFGLHAMVKETACLARCMCIYRGFGFMVDVDKSLPDNLIGDEKRVFQVIMHMVGNVINGNHGGVLVFRVFAETGSQGRNNDQGWTNWRPSSSSGDVNIRFEVGINSGDPESSSVPSGQLAGTKHAGDRVEDNRLSFSICKRIIQQLMQGNIWFVPNAQGFPQVMSLFLRFQLQQSIALSISEPGESSEPSSSNSFFRGLQVLLADNDSINRAVTQKLLQKLGCVVTSVSSGFECLSVVGPAGSSFQVILLDLHMPELDGFEVATRIRKFRSQDWPVIVALTASTEDLRERCMQIGMNGVIRKPVLLHGIASELRRILLQGNSAM 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0213 763 CDD HATPase_ETR2_ERS2-EIN4-like 473 607 - -
Aed8g0213 763 PIRSF Ethylen_sen_hybr_HK 1 763 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Aed8g0213 763 ProSiteProfiles Response regulatory domain profile. 639 756 IPR001789 GO:0000160
Aed8g0213 763 Coils Coil 337 364 - -
Aed8g0213 763 Gene3D - 164 332 IPR029016 -
Aed8g0213 763 Gene3D - 620 756 - -
Aed8g0213 763 SUPERFAMILY CheY-like 635 756 IPR011006 -
Aed8g0213 763 SUPERFAMILY GAF domain-like 188 334 - -
Aed8g0213 763 CDD REC_ETR-like 638 752 - -
Aed8g0213 763 SMART HisKA_10 367 432 IPR003661 GO:0000155|GO:0007165
Aed8g0213 763 Pfam Response regulator receiver domain 640 743 IPR001789 GO:0000160
Aed8g0213 763 Gene3D - 431 612 IPR036890 -
Aed8g0213 763 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 432 502 IPR036890 -
Aed8g0213 763 SMART REC_2 638 756 IPR001789 GO:0000160
Aed8g0213 763 SMART gaf_1 185 341 IPR003018 GO:0005515
Aed8g0213 763 CDD HisKA 366 427 IPR003661 GO:0000155|GO:0007165
Aed8g0213 763 MobiDBLite consensus disorder prediction 545 564 - -
Aed8g0213 763 Pfam GAF domain 185 331 IPR003018 GO:0005515
Aed8g0213 763 Gene3D - 333 430 - -
Aed8g0213 763 PANTHER ETHYLENE RESPONSE SENSOR 2 13 760 - -
Aed8g0213 763 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 359 433 IPR036097 GO:0000155|GO:0007165
Aed8g0213 763 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 13 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0213 Aed-Chr8 1826485 1831188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0213 25 756 Miscellaneous Gene Families AT3G04580 55.973 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed8g0213 GAF 2.1e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0213 K14509 - gmx:100802948 1295.8