Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0212 ATGGACCTCTCCATCAACGAAAGAACCCTCGTTAGAGAAAGACAAGAGGATGGAGAAGAAGAAGAAGACGAAAGAGACAACGATGATGAACCCAAAGAGGGTGCAGTTGAGGTTGGAACACGCAGGCCAAGAGGGAGACCACCCGGTTCCAAAAACAAGCCCAAACCCCCCATCTTCGTCACTAGGGACAGCCCCAACTCCCTCAGAAGCCATGTCATGGAGGTTGCTGGCGGCACCGACGTGGCCGAAAGCGTTGCACAGTTCGCACGGAGACGCCAGCGTGGGGTGTGTGTCCTCAGCGGGAGCGGCTCCGTGGCCAACGTTACTCTCCGGCAACCTTCGGCTCCCGGAGCGGTGGTAGCACTTCATGGAAGGTTCGAGATTCTGTCCCTAACGGGAGCGTTTCTACCTGGTCCTGCCCCACCTGGAGCCACAGGATTAACCGTGTATCTCGCTGGGGGTCAGGGCCAGGTAGTGGGAGGTAGCGTTGTGGGCTCCCTCGTGGCAGCTGGGCCGGTGATGGTGATAGCTGCCACTTTTGCTAATGCTACCTATGAGAGGTTGCCACTTGAGGAGGAGGAAGACGACGGTGGTGGTGGTAGCGTGCAAGGAGGAAGTACCCTGGGAGGGTCTCCTCCTGGAATTGGTAGTAGTGGTGGTGGGGGCCACTTGTCGGGTGGGATTCCTGATCCTTCTTCTTTGCCTTTGTATAGTCTCCCTCCAAATCTTCTTCCTAATGGAGGCCAAGTGGGCCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGGCCATCTTACTAA 801 0.568 MDLSINERTLVRERQEDGEEEEDERDNDDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGTDVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGGSVQGGSTLGGSPPGIGSSGGGGHLSGGIPDPSSLPLYSLPPNLLPNGGQVGHEAFAWAHGHGRPSY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0212 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 69 181 IPR005175 -
Aed8g0212 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 65 193 - -
Aed8g0212 266 MobiDBLite consensus disorder prediction 1 15 - -
Aed8g0212 266 ProSiteProfiles PPC domain profile profile. 65 203 IPR005175 -
Aed8g0212 266 CDD DUF296 69 152 IPR005175 -
Aed8g0212 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 3 264 - -
Aed8g0212 266 Gene3D - 68 195 - -
Aed8g0212 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 264 IPR014476 GO:0003680
Aed8g0212 266 PIRSF ESCAROLA 4 266 IPR014476 GO:0003680
Aed8g0212 266 MobiDBLite consensus disorder prediction 16 30 - -
Aed8g0212 266 MobiDBLite consensus disorder prediction 191 232 - -
Aed8g0212 266 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0212 Aed-Chr8 1810639 1811439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0212 31 266 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 69.874 6.62e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0212 - - gmx:102663643 337.806