Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0203 ATGGAGAAAGAGGGTTCAAGTGGAAAAGGCAAGGATGAAGATGAAGAGCATGTTAAGTACAGAGGGGTACGTAGGAGGCCATGGGGAAAATTTGCAGCAGAGATTCGTGACTCAATGAGACAAGGTCAAAGGTTGTGGCTTGGAACATTCAACACTGCTGAGGATGCAGCTAGAGCCTATGATAGAGCTGCTTATGCCATGAGGGGTCCCTTTGCTGTCCTCAATTTCCCTAATGAATACCCTCCTTTAGGACTTGATGCTACTGCTTCCTCTTCTTCTTCCAATGCTTCATCAGCATCTGCACCCTCTTCTAGTCATGTGGAAGGAATTAGAGGAAGGAGTGAGCAAGCACCAAACCAAGTGATTGAGTTTGAGTACTTTGATGACAAGTTGTTGGAGGAGCTTCTTGGTTATGATCAAGACAAAAATAAGCATCAGAAGTGA 444 0.4482 MEKEGSSGKGKDEDEEHVKYRGVRRRPWGKFAAEIRDSMRQGQRLWLGTFNTAEDAARAYDRAAYAMRGPFAVLNFPNEYPPLGLDATASSSSSNASSASAPSSSHVEGIRGRSEQAPNQVIEFEYFDDKLLEELLGYDQDKNKHQK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0203 147 SUPERFAMILY DNA-binding domain 19 78 IPR016177 GO:0003677
Aed8g0203 147 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Aed8g0203 147 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Aed8g0203 147 MobiDBLite consensus disorder prediction 85 110 - -
Aed8g0203 147 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Aed8g0203 147 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Aed8g0203 147 PANTHER OS09G0571700 PROTEIN 13 140 - -
Aed8g0203 147 PANTHER DNA-BINDING DOMAIN 13 140 IPR044808 GO:0003700|GO:0009873
Aed8g0203 147 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Aed8g0203 147 MobiDBLite consensus disorder prediction 83 116 - -
Aed8g0203 147 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Aed8g0203 147 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0203 Aed-Chr8 1728552 1728995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0203 1 142 AP2-EREBP Transcription Factor Family AT3G23230 52.113 9.46e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed8g0203 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0203 - - gmx:100781117 202.601