Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0200 ATGGAACGTGGGGTTCTTGATGGTATCATCAATAGGCTTCTTCAAGTGAGAGGGAGACCTGGGAAACAGGTGCAGCTTTCAGAGGCAGAAATAAGACAGCTTTGTATGGTCTCTAGAGACATCTTTTTGAAGCAGCCCAATCTGTTGGAACTTGAGGCACCAATTAAGATATGTGGAGACATCCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTGGATTGCCTCCTCGCTCCAACTACTTATTCTTAGGTGATTATGTGGACCGTGGAAAACAAAGCCTTGAGACTATGTGTCTTCTCTTGGCCTACAAGATAAAGTACCCTGAGAATTTCTTCCTTCTTAGAGGCAACCATGAATGTGCTTCCATAAACCGTGTCTACGGCTTCTATGACGAATGTAAACGACGATTCAATGTCAGGCTGTGGAAGATATTTGCAGATTGCTTCAACTGCATGCCTGTGGCAGCTGTTATTGATGAAAAGATATTCTGTATGCATGGTGGACTCTCTCCTGAATTGCACAATCTAAGTCAGATAAGTAATTTGCCGCGTCCTACAGAAGTACCTGAGAGTGGTTTACTGTGTGATCTCTTGTGGTCTGATCCTAGTAAAGACATTGAAGGTTGGGGAGAGAATGAACGCGGAGTTTCATACACTTTTGGTGCTAGCAGGGTCACAGAATTTCTTAGAAAGCATGATCTTGACTTGATTTGTAGAGCACACCAGGTTGTTGAAGATGGATATGAGTTTTTTGCCAATAGACAACTTGTGACTATCTTTTCTGCACCTAACTACTGTGGAGAGTTTGACAATGCTGGAGCAATGATGAGTGTTGATGAGACACTTATGTGCTCTTTTCAGATACTAAGGCCTGTGGAACACAGAAAGCCTAAGTTTGCTTTAGGGAGCAAAACTACATTCAAGGCTAGTACTTCTAACAAAAATCTTGGTATTTTAGTTCTTGAATCCAGAATTTTCACACTAATGAATGAATGGAATAGTTCTTTGGTAGTTTCTTCATGTTGTTGCTACTATATCATGTTTATTATTGATTTTAACTGTGCAGTGCAACTATAA 1086 0.4079 MERGVLDGIINRLLQVRGRPGKQVQLSEAEIRQLCMVSRDIFLKQPNLLELEAPIKICGDIHGQYSDLLRLFEHGGLPPRSNYLFLGDYVDRGKQSLETMCLLLAYKIKYPENFFLLRGNHECASINRVYGFYDECKRRFNVRLWKIFADCFNCMPVAAVIDEKIFCMHGGLSPELHNLSQISNLPRPTEVPESGLLCDLLWSDPSKDIEGWGENERGVSYTFGASRVTEFLRKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILRPVEHRKPKFALGSKTTFKASTSNKNLGILVLESRIFTLMNEWNSSLVVSSCCCYYIMFIIDFNCAVQL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0200 361 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Aed8g0200 361 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 324 - -
Aed8g0200 361 SMART pp2a_7 26 296 IPR006186 GO:0016787
Aed8g0200 361 Gene3D - 2 304 IPR029052 -
Aed8g0200 361 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 324 - -
Aed8g0200 361 SUPERFAMILY Metallo-dependent phosphatases 18 299 IPR029052 -
Aed8g0200 361 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Aed8g0200 361 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Aed8g0200 361 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Aed8g0200 361 CDD MPP_PP1_PPKL 5 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0200 Aed-Chr8 1717499 1719536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0200 33 242 Calmodulin-binding Proteins AT5G63870 30.677 5.27e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0200 K06269 - gmx:100813763 625.165