Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0187 ATGGAAACTACAAGGCGGTGGTTTAGTAAGTTCAAGTCAAATGATAAAGTGAAGTCTGCAAAGAACAAAGAAACTACAGGCGTAACAAAAGAAGGGTCAAAACCCCCAACAAATGAAGAAGCACCTTCAAATGTAACCAAACAGAGGGTTGAAGCTGCAAAGCAGTACATAGAAAATCATTATAAGAAGCAGATGCAAAGCCTGCAGGAGAGGAAGGAAAGACATAAAATGGGGGCTGATGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTGAACATGTCAAAGCTGAGAGAAATCTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAGGAGTATTTATATCTCATAATGGAGTACCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTTCTAGCCATAGAGTCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGCCACATGAAATTATCAGATTTTGGATTGTGTAAACCGCTAGACTGCAGTAATCTTCAAGAAAAGGACTTATCTGTTGGAATTAACAGAAGTGGAGCCCTCCAAAGTGATGGACGTCCTGCAGCTCCTAAACGAACCCAACAGGAACAGCTTCAGCATTGGCAGAAAAATCGGCGAATGCTTGCCTATTCTACAGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTTCTGAAGAAAGGATATGGTGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGTTTTCCACCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTACTTTAAAATTTCCAGAAGAAGCTAAACTTTCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCCGATGAAATAAAGGCTCACCCATGGTTCAAAGGTGCTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTCATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGCGGACAAGCAAACTGTACCTTCCTCAAAGTCAGGGCCGTGGAGAAAGATGCTGCCATCTAAAGATATTAACTTCGTTGGCTACACATACAAGAATTTTGAAATCGTGAATGATCATGAAATACCTGGAATTGCTGAATTGAAGAAGAAGAGCACTAAACCTAAAAGACCATCTATTAAGGCCCTATTTGATGATGAATCGGCTACGGCTGACAATCAACCTGTCAGAGGGAGCTTCTTAAACCTCTTACCTCCTCAAATGGAAGATCCTGAAAAAAGTGAATCACAATGA 1449 0.403 METTRRWFSKFKSNDKVKSAKNKETTGVTKEGSKPPTNEEAPSNVTKQRVEAAKQYIENHYKKQMQSLQERKERHKMGADDFEPLTMIGKGAFGEVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDLSVGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGFPPFYSDEPMLTCRKIVNWRTTLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGAEWDKLYQMKAAFIPEVNDELDTQNFEKFEEADKQTVPSSKSGPWRKMLPSKDINFVGYTYKNFEIVNDHEIPGIAELKKKSTKPKRPSIKALFDDESATADNQPVRGSFLNLLPPQMEDPEKSESQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0187 482 MobiDBLite consensus disorder prediction 434 482 - -
Aed8g0187 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Aed8g0187 482 MobiDBLite consensus disorder prediction 1 47 - -
Aed8g0187 482 CDD STKc_NDR_like 80 417 - -
Aed8g0187 482 SUPERFAMILY Protein kinase-like (PK-like) 67 405 IPR011009 -
Aed8g0187 482 Gene3D Phosphorylase Kinase; domain 1 372 382 - -
Aed8g0187 482 ProSiteProfiles Protein kinase domain profile. 1 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0187 482 PANTHER SERINE/THREONINE-PROTEIN KINASE 71 96 - -
Aed8g0187 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 71 96 - -
Aed8g0187 482 Pfam Protein kinase domain 97 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0187 482 SMART pkinase_C_6 354 418 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed8g0187 482 Gene3D Phosphorylase Kinase; domain 1 4 96 - -
Aed8g0187 482 Pfam Protein kinase C terminal domain 372 416 IPR017892 GO:0004674|GO:0005524|GO:0006468
Aed8g0187 482 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 73 - -
Aed8g0187 482 MobiDBLite consensus disorder prediction 1 28 - -
Aed8g0187 482 MobiDBLite consensus disorder prediction 434 448 - -
Aed8g0187 482 MobiDBLite consensus disorder prediction 29 47 - -
Aed8g0187 482 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 480 - -
Aed8g0187 482 ProSitePatterns Protein kinases ATP-binding region signature. 88 116 IPR017441 GO:0005524
Aed8g0187 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 96 480 - -
Aed8g0187 482 Gene3D Phosphorylase Kinase; domain 1 97 137 - -
Aed8g0187 482 Gene3D Transferase(Phosphotransferase) domain 1 138 203 - -
Aed8g0187 482 Gene3D Transferase(Phosphotransferase) domain 1 252 371 - -
Aed8g0187 482 SMART serkin_6 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0187 482 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 73 - -
Aed8g0187 482 ProSiteProfiles AGC-kinase C-terminal domain profile. 354 426 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0187 Aed-Chr8 1616614 1622544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0187 1 476 AGC Kinase Gene Family AT4G14350 73.567 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aed8g0187 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0187 K08790 - gmx:100795087 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0157 4 1136185 1140757 Aed8g0187 8 1616614 1622544 PCT