Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0181 ATGGGGAGGACAGGGAAATGGCTTAGAAACTTGTTGACAGGAGGAGGGAAGAAAGAGAAGAAGGAGAAATGTGGTACCAACATGTGTTTGTTGAATGCCACAACCACACCTGTTTCAACAACAACAACAACAACAACCCCCAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCCAGGGAACTCAATCTTGCAGAATCTGCTCTCACTGCTTCACTCACACTGCAAAATTCAACCCCAGATGCTGAGAATGATCAAAGGAAACATGCCATGCTTGCTGTGGCTGCACCTGATTCCAATGGATTATGTGTTGAAGAGGCTGCAGCCACTCAAATTCAATCAGTGTTTCGTTCATACCTGGCAAGAAAGGCACTTTATGCTCTTAGAGGACTAGTGAAGCTGCAGGCACTGGTGAGGGGTCATTTGGTGAGAAAACAGGCCAGGGAAACACTGAGATGCATGCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCGCGGATGGGGTCAGAAGTACAACCTGATCAAAAGCTATCATCACCCTACAGAATAACCACCGAGGAAAAAAACTTCTTCATGCATATGTATAATGAAATGGACAGTGGTTTGCAAGAGAATGCCAAGATTGTGGAGATGGCTGTTTGTGAATCCAAAGGAAACTCAAGAGGCAGAAAAAGCACTGCGAATGGTTCATACTCAAAGGAAGAAAACCACAATGCTGCATCACCTGCACCATCAACACTAACAGAATTGAGTCCAAGAGCATGCAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACGGCACAAAGTAGTCCTTATTACTACTCAGAAGTGGCAAGAGTGGACAATACACCAAATGTTCCTTTTGCTTTCCCTAAACCAGCCTCCTACACAGAACCAATGTCCTATGACTACCCTTTGTTTCCAAACTACATGGCCAACACAGAATCATCAAGGGCCAAATCCAGATCACAGAGTGCACCAAAGGCAAGGCCGGCAGATTCATTCGAGAGGCAACCGAGCCTGAGCCGGAGAAGGGCTTCAATGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCACAAAACTACCAATATCCATCTTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCCACAAGTACAGTGCTCACAAACTCTAATTACTACTGCACATGA 1233 0.4623 MGRTGKWLRNLLTGGGKKEKKEKCGTNMCLLNATTTPVSTTTTTTTPKEKRRWSFRRSSASRELNLAESALTASLTLQNSTPDAENDQRKHAMLAVAAPDSNGLCVEEAAATQIQSVFRSYLARKALYALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQARARAQRARMGSEVQPDQKLSSPYRITTEEKNFFMHMYNEMDSGLQENAKIVEMAVCESKGNSRGRKSTANGSYSKEENHNAASPAPSTLTELSPRACSGHFEECSFSTAQSSPYYYSEVARVDNTPNVPFAFPKPASYTEPMSYDYPLFPNYMANTESSRAKSRSQSAPKARPADSFERQPSLSRRRASMEGRNVPRPVRMQRSSSHVGVTAQNYQYPSSIKLDRSIVSECGSTSTVLTNSNYYCT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0181 410 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Aed8g0181 410 MobiDBLite consensus disorder prediction 225 257 - -
Aed8g0181 410 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 399 - -
Aed8g0181 410 PANTHER IQ-DOMAIN 5-RELATED 1 399 - -
Aed8g0181 410 MobiDBLite consensus disorder prediction 321 375 - -
Aed8g0181 410 MobiDBLite consensus disorder prediction 1 20 - -
Aed8g0181 410 Pfam IQ calmodulin-binding motif 109 126 IPR000048 GO:0005515
Aed8g0181 410 Pfam IQ calmodulin-binding motif 134 150 IPR000048 GO:0005515
Aed8g0181 410 MobiDBLite consensus disorder prediction 343 357 - -
Aed8g0181 410 Pfam Protein of unknown function (DUF4005) 287 357 IPR025064 -
Aed8g0181 410 Gene3D - 106 158 - -
Aed8g0181 410 SMART iq_5 106 128 IPR000048 GO:0005515
Aed8g0181 410 SMART iq_5 129 150 IPR000048 GO:0005515
Aed8g0181 410 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0181 Aed-Chr8 1555380 1557864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0181 1 407 IQD Protein Family AT4G14750 46.606 4.01e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0181 - - gmx:100810189 571.622