Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0179 ATGGCCAACAACAACAACAACTTCTACAGAGGTTCACAATTTCCTGGATTTTACAACAACACAGTCCCAAATGGATGCAGGTTGTGCAACCAAGTTTTCAGCAGCACTCAGGCTCTTCTGACCCATGTTGAGTCTCACATGGCACAAGAAGTGGTTGCACTTAACCAGCTCTATTCGTCACCACAACATGTCAATAATCCTCAACACCAATTCCCACAACCAGCTACTATGGGTGATGGTGGTGGGAGTTTCCAAGCACAATCATCACAACCAATGGGGATCATGATGCCTCAGCCAATTAGTAGAAACCACCCATTTTTCAATTCTAGCCAAATTGGTGGTTCTTCATCGTCATCATCATCAATGCCAATTAGGCAAATGCAAGTTCCACCACAGGTTTTTCCATATGCTGGGAGTAGTAGTAGGTTGGAGATACCCATCAAGAAGGTTGATTTCATTGATTTGGTTAACGTGGATGATGATGACAACAACTCAGAGCCAGAGGAGATGGATTTGGATCTTAAGCTCTAG 531 0.4369 MANNNNNFYRGSQFPGFYNNTVPNGCRLCNQVFSSTQALLTHVESHMAQEVVALNQLYSSPQHVNNPQHQFPQPATMGDGGGSFQAQSSQPMGIMMPQPISRNHPFFNSSQIGGSSSSSSSMPIRQMQVPPQVFPYAGSSSRLEIPIKKVDFIDLVNVDDDDNNSEPEEMDLDLKL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0179 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 24 51 IPR013087 -
Aed8g0179 176 MobiDBLite consensus disorder prediction 99 124 - -
Aed8g0179 176 ProSitePatterns Zinc finger C2H2 type domain signature. 26 46 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed8g0179 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0179 - - pvu:PHAVU_007G277300g 105.531