Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0176 CTATTTTTTCATCTGACTATTGATTTTGTAGTATCTGATATTCATCTGCTTGAAAAGCCACATATTCTCAAGGCTCGGATCAAATCGTTTCAGAAAAACATGGGAATAAGAGACTTTCATATGAAGCTTAAGCAGACATTCCGGGTGAAACTTTTTTTCTTTGGAAGAAGGAGGAATAGATGGAGTGCAAACAAGCCTTCATGGATGATTCCAATATCACATGGCCATCATGTGGTGGAGCATCATCATCATCATCATAATGTAATCAAAGGTGGTTCTGGTGACTCGGTCTTTGATTCAGTTGTGATACAGAGAGAGCAAATGGATCACACAGAAGTGTGGTATTTTGGAATCTTTGATGCTGTAGTTGGAGATGGAGTTACCAAGTATATGCAATCCCATTTCTTTGGCAAGAAGCTAAAAGAGAGGGCTTACCTAGGTGTAAAAATAAAGATGAGAGAGGGACACAAGCAGGCAGAGGAGGAGACATGTAGAATAGGTTCAACATCAGTGATGGTGATAAATGGAGAAAAGCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGCAGAGATGGTGTAGCTTATCAGACAACTGGCAGATACAATCAATCAGCCAAGAGACATTGGTATCGCAATCTCTTTTCAGTACGCATGATAGCATGTGATTCAGGCAAAACAAAAGGTACAAAGCACTCTAAAGGCTCAGAACTTGTGGTGGGAGGTGATAGAATCGACTCAGAAACTGAATTTTTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATAAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTTTGATTAGGATGACCAAAAGCAGCATTTCATGCTTAATCATTCGCTTTGACTGA 927 0.4045 LFFHLTIDFVVSDIHLLEKPHILKARIKSFQKNMGIRDFHMKLKQTFRVKLFFFGRRRNRWSANKPSWMIPISHGHHVVEHHHHHHNVIKGGSGDSVFDSVVIQREQMDHTEVWYFGIFDAVVGDGVTKYMQSHFFGKKLKERAYLGVKIKMREGHKQAEEETCRIGSTSVMVINGEKLVIANMGDYRTVLCRDGVAYQTTGRYNQSAKRHWYRNLFSVRMIACDSGKTKGTKHSKGSELVVGGDRIDSETEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMTKSSISCLIIRFD 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0176 308 Gene3D - 76 216 IPR036457 -
Aed8g0176 308 CDD PP2Cc 99 307 IPR001932 -
Aed8g0176 308 SUPERFAMILY PP2C-like 91 308 IPR036457 -
Aed8g0176 308 Gene3D - 238 308 IPR036457 -
Aed8g0176 308 PANTHER ALPHABET, ISOFORM E-RELATED 44 307 - -
Aed8g0176 308 Pfam Protein phosphatase 2C 246 298 IPR001932 -
Aed8g0176 308 Pfam Protein phosphatase 2C 110 200 IPR001932 -
Aed8g0176 308 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 44 307 - -
Aed8g0176 308 SMART PP2C_4 79 305 IPR001932 -
Aed8g0176 308 ProSiteProfiles PPM-type phosphatase domain profile. 95 307 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0176 Aed-Chr8 1501744 1505062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0176 34 307 PP2C-type Phosphatase Gene Family AT3G23360 46.403 2.03e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0176 K19704 - gmx:100794054 457.603