Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0160 ATGCCAGTGAGACAGATGAGGGAGAGCTCAGAACAGCACCTTGTGATCAAACCCCATCTGCAGAACCCCATGAATGCAGCTAAGAAGGTTCCTAGAGCTGTTCAAAATGGAAAAGGTCCACCACCACTGCCACAAGAACCCCACATCCAAACTTCACCTCAGGCAAGGAACAAGGGGAGAAGAAGGAGTAGAGGGGGCAGAAAATGTGATCAAGGAGATGTTTTGATGAGACCTATTGTGACAAGTGCTGTTGAAAATGGAAGCACCATGTGTGGTGAAATAGTGATGGGTTACCCTACTTCAAGCAAGTCTTTGAGCTTTGCTCCAAGGCCTGGCTTTGGACAAGTTGGGACAAAGTGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATGTCAGTATTACCCCTGAAGTGTCTTCCAAAGCAGTGAACAGGTCCATTATAGCAGAACTTGTGAGGCTGTATAAAGAATCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGAAAAACTGGTAAACGTGCTGATGCTCCACAAGAGGCACTCCAAATTCTTGACATTGTATTAAGAGAGCTATCATCTAAGAGGTTTTGCCCAATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCACAACGGCTTGGAGAGGGTTTGGAATCGTGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTCATTGAACCTCTTCCAGTTGTGGAATATGTTGGCCAGCTATTAGGAAAAGATATCCTGTCGAGGCAATTGTCTGACGCTGATCGCATTAAAATTAAGAAAGCTCTTAGAGGAGTTAAAGTTGAAGTAACCCACAGAGGGAATGTTAGAAGAAAGTATCGGGTTTCTGGTTTGACTTCTCAACCAACCAGAGAGCTTGTGTTTCCTGTTGATGAGAATTCAACTATGAAGTCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACAATTAAATATACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGACAACGATATACGAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCCTGAAAGTTACCTGTCAAAGACCTCGTGATCGAGAAAATGACATTTTGCAGACCGTTCAGCACAATGCTTATGATCAAGATCCTTATGCAAAGGAATTTGGAATTAAAATAAGTGAAAAGCTAGCTTCTGTAGAAGCACGGATTCTCCCTGCCCCATGGCTTAAATATCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATAAATGGAATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCACGAAGTGTACAAGACAGTGTTGCTCGCACTTTTTGTACTGAACTAGCTCAAATGTGCCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATCTACAATGCCAAACCTGAGCATGTCGAGAAAGCTTTGAAGCATGTTTATCATGTGTCAACAAACAAAACCAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCTGACAGCAATGGTTCACTCTATGGTGATCTCAAGCGTATTTGTGAAACAGACCTTGGTTTAATTTCTCAATGTTGTTTGACAAAGCATGTCTTTAAGATCACTAAGCAGTATTTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACAGTTCTGGTTGATGCTGTAAGCTGCCGAATACCATTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCATCCTGAAAATGGAGAAGATTCCAGCCCTTCAATAGCAGCTGTAGTAGCATCTCAAGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAACTCATACAAGATTTGTACAAAATGTGGCATGACCCTGTTCGTGGTCTAGTCAGTGGTGGCATGATTCGAGATTTGTTGATTTCCTTTAGAAAAGCAACAGGACAGAAGCCTCTAAGGATCATATTTTATAGGGATGGTGTAAGTGAAGGCCAATTTTACCAAGTTCTACTTTATGAGTTGGATGCAATTCGAAAGGACAGGAGCAGTACAGATAAGAGTGGAAATATATTGCCTGGGACTGTGGTTGATTCCAAAATCTGTCATCCAACGGAATTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACGAGTCGTCCAGCTCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGTATTCAGTCTCTGACAAACAATCTCTGTTATACATATGCCAGGTGTACACGCTCCGTATCTGTTGTTCCTCCGGCATATTATGCACACTTGGCAGCTTTCCGAGCGCGTTTCTATATGGAACCAGACCTGCAGGAGAATGGCTCCTCAGGTGGTGGTTCGAAGGCAACAAAAGCGGGTGGAGAGTGTGGTGGGGTGAAACCATTGCCAGCTCTGAAAGAAAATGTGAAGAGAGTGATGTTTTATTGTTAG 2643 0.4241 MPVRQMRESSEQHLVIKPHLQNPMNAAKKVPRAVQNGKGPPPLPQEPHIQTSPQARNKGRRRSRGGRKCDQGDVLMRPIVTSAVENGSTMCGEIVMGYPTSSKSLSFAPRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVSITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKTGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEYVGQLLGKDILSRQLSDADRIKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILQTVQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCTELAQMCQVSGMEFNPEPVIPIYNAKPEHVEKALKHVYHVSTNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGSKATKAGGECGGVKPLPALKENVKRVMFYC 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0160 880 Pfam Argonaute linker 2 domain 401 447 IPR032472 -
Aed8g0160 880 Gene3D - 740 880 IPR036397 GO:0003676
Aed8g0160 880 CDD PAZ_argonaute_like 260 374 - -
Aed8g0160 880 SMART PAZ_2_a_3 265 397 IPR003100 GO:0005515
Aed8g0160 880 Pfam N-terminal domain of argonaute 119 181 IPR032474 -
Aed8g0160 880 PANTHER PROTEIN ARGONAUTE 10 739 879 - -
Aed8g0160 880 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 181 739 - -
Aed8g0160 880 PANTHER PROTEIN ARGONAUTE 10 57 180 - -
Aed8g0160 880 PANTHER PROTEIN ARGONAUTE 10 181 739 - -
Aed8g0160 880 ProSiteProfiles Piwi domain profile. 549 838 IPR003165 GO:0003676
Aed8g0160 880 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 739 879 - -
Aed8g0160 880 Pfam Mid domain of argonaute 458 535 IPR032473 -
Aed8g0160 880 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 180 - -
Aed8g0160 880 Pfam Piwi domain 550 741 IPR003165 GO:0003676
Aed8g0160 880 Pfam Piwi domain 744 837 IPR003165 GO:0003676
Aed8g0160 880 Gene3D - 618 739 IPR036397 GO:0003676
Aed8g0160 880 Pfam Argonaute linker 1 domain 209 258 IPR014811 -
Aed8g0160 880 SUPERFAMILY Ribonuclease H-like 541 839 IPR012337 -
Aed8g0160 880 SUPERFAMILY PAZ domain 255 415 IPR036085 GO:0005515
Aed8g0160 880 ProSiteProfiles PAZ domain profile. 261 375 IPR003100 GO:0005515
Aed8g0160 880 MobiDBLite consensus disorder prediction 1 70 - -
Aed8g0160 880 Gene3D paz domain 254 379 - -
Aed8g0160 880 CDD Piwi_ago-like 419 837 IPR045246 -
Aed8g0160 880 SMART Piwi_a_2 549 838 IPR003165 GO:0003676
Aed8g0160 880 Pfam PAZ domain 287 391 IPR003100 GO:0005515
Aed8g0160 880 SMART DUF1785_2 208 260 IPR014811 -
Aed8g0160 880 Gene3D - 439 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0160 Aed-Chr8 1368492 1376842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0160 182 880 Eukaryotic Initiation Factors Gene Family AT5G43810 85.929 0.0 1327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0160 K11593 - cit:102628378 1509.97