Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0149 ATGGATGCATCGTCGTCGCCACGCACCATCCTGGGCAAGTACCAGCTCACGCGCTTCCTCGGACGTGGCAACTTCGCCAAGGTCTACCAAGCGCGTTCCCTCCTCGACGGTGCCACGGTGGCCGTCAAAGCCATCAATAAGTCCAAGACGTTCGACGCCGTCATGGAGCCCCGCATCATTCGCGAGATCGACGCCATGCGCCGCCTCCACCACCACCCTAACATCCTCAAAATCCACGAGGTCTTGGCTACCAAGACCAAGATCTACCTCATCGTCGACTTCGCCGGTGGCGGCGAGCTCTTCTCCAAGCTGTCCCGCCGCGGCCGCCTCCCGGAGCCCCTCGCCCGCCGCTACTTCTCGCAGCTAGTCTCGGCGCTCCGATTCTGCCACCGCAACGGCGTGGCGCACCGCGACCTCAAGCCGCAGAACCTCCTCCTGGACGCCGCCGGCGACCTCATGGTCTCCGACTTCGGTCTCTCCGCGCTCCCAGAGCACCTCCACGACGGGCTCCTCCACACGGCCTGCGGCACGCCGGCCTTCACCGCACCAGAGATTCTCCGCCGTGTCGGCTATGACGGCTCGAAGGCGGATGCCTGGTCCTGCGGCGTGATCCTCTACAACCTCCTTGCCGGCCACCTCCCTTTCGATGACTCCAACATTCCGGCCATGTGCCGCCGAATCTCCCGCCGCGACTACCAGTTCCCGGCGTGGATCTCGAAATCCGCGCGGAGCCTAATTAACCAATTGCTGGACCCGAACCCTAAGACGCGAATTTCGTTGGAAAATGTTTGCGATAACAAATGGTTCAGGAATAAAAATAATACAGTGAAAGCGGAAGAGAGTGTTTTGGAGTCTGATTTGTATAACAAGTGCTGCGACAGTTATAAATCGGGGATGAACGCGTTTGACATAATATCGATGTCGTCGGGGTTGGATTTGCGGGGGTTGTTCGAAACGACGTCGGAGAAGGAGAGGAGGAGGGAGAAAAGGTTCACTTCGGATAAGAGTGTGGAGGTGGTGGAGGCGAAGGTGAAGGAGGTTGGAGAGAAATTAGGGTTCAAGGTTGAGATTGGGAAGAACGGTGCGATTGGGTTGGGGAAGGGGAAGGTGGCACTTGTGGTGGAGGTGTTTGAGATTGTGACTGAGTTGTTGCTTGTGGCGGTGAAAGTGGTGGATGGTGGGGTGGAGTTTGAGGAGCTTCATTGGAATCATTGGAGATTTGGGCTTCAAGATCTTGTTCTTTCATGGCATAACAATAAGGATGATGACTTACCAATCTTGTCCCAGTACTAG 1293 0.57 MDASSSPRTILGKYQLTRFLGRGNFAKVYQARSLLDGATVAVKAINKSKTFDAVMEPRIIREIDAMRRLHHHPNILKIHEVLATKTKIYLIVDFAGGGELFSKLSRRGRLPEPLARRYFSQLVSALRFCHRNGVAHRDLKPQNLLLDAAGDLMVSDFGLSALPEHLHDGLLHTACGTPAFTAPEILRRVGYDGSKADAWSCGVILYNLLAGHLPFDDSNIPAMCRRISRRDYQFPAWISKSARSLINQLLDPNPKTRISLENVCDNKWFRNKNNTVKAEESVLESDLYNKCCDSYKSGMNAFDIISMSSGLDLRGLFETTSEKERRREKRFTSDKSVEVVEAKVKEVGEKLGFKVEIGKNGAIGLGKGKVALVVEVFEIVTELLLVAVKVVDGGVEFEELHWNHWRFGLQDLVLSWHNNKDDDLPILSQY 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0149 430 Gene3D Transferase(Phosphotransferase) domain 1 100 277 - -
Aed8g0149 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 419 - -
Aed8g0149 430 Pfam NAF domain 299 356 IPR004041 GO:0007165
Aed8g0149 430 PANTHER SERINE/THREONINE KINASE 8 419 - -
Aed8g0149 430 SUPERFAMILY Protein kinase-like (PK-like) 10 278 IPR011009 -
Aed8g0149 430 Gene3D Phosphorylase Kinase; domain 1 16 99 - -
Aed8g0149 430 SMART serkin_6 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0149 430 ProSiteProfiles Protein kinase domain profile. 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0149 430 Gene3D Kinase associated domain 1, KA1 296 414 - -
Aed8g0149 430 Pfam Protein kinase domain 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0149 430 ProSiteProfiles NAF domain profile. 294 318 IPR018451 GO:0007165
Aed8g0149 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Aed8g0149 430 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Aed8g0149 430 CDD CIPK_C 300 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0149 Aed-Chr8 1273704 1274996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0149 3 419 Miscellaneous Gene Families AT3G23000 58.392 2.46e-166 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed8g0149 Pkinase 3.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0149 K12761 - gmx:100305372 727.628