LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed8g0144	ATGGCATGTGGCAGAGTAGCATTCAGTGTGATCGGCCTCAGCATCAGCTTAGCATGTACATCAGCACTACCACTACCACCAAATTTGTTCTCCCGAAATTCTCTTTCTCTCCCTTCTAGTTCTAATCCTCATCCTAACTATTTATCATCAACATCCACGCCTCTCACTGCCAGCAGAAGGTTTTCATTTTCAGCCATGGATAAGCAAGACGCAGCAGCGGCGGAGCAAGACTACGCAGTTCACTCCACCTTACTCCAAGAATTCAACGCCATCTCCACCATCGACAAGGCATGGCTCTTCAAATCCCACACTCACACCGGCTCGGCTTCTTCTCATGCAATGTTCTGCGTTAGTCAACCCAACCTTTTGGTCAACAAGAGGAAGAAATCCATCGTCTCCGCTACCATTCTCACACAAAACGACGGTTCCTCCGTCGCGTTTCACTGGGCTCCGTTTCCGATCGAAATGTCTGGAGTCTCCACAATGGTTCCGTCACCTTCTGGCTCCAAGCTTCTAATTGTTCGAAATCCCGAGACTGAAGCATATGTGGCTGAAGAGCCAGCCCCTGCAAAGCCCACATTCAATGATCTGGGCGACTACAAGAAAGCTGGTTCTTCAGACCAGGATTGTGGTACCTGGAAAGGTCATGGGGAGTGGGAGGAGGACTGGGGAGAGACATATGCAGGAAAGAGGCCGCCTGCACTTTTTGTCATCAATGTCAACAGGCCGTGTGCATTATATGCTGTTAAAGCACCACACCATAACTCAAAAGCTAATGAAACTGAAATTCAATCAACTGGAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGCGCATTCTTTCCACGGTTCAGCCCAGATGGAAAATTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGAGCCCATTCTGCTACTGATTCATTTCATAGAATTGATTGGCCTGAAGATACAAAGCTTTATCAATCAGCTAAAATTCATGAAGTGATTCCAGTTGTATTGTTTGCTGAGGATGGCAGTTTCCCTGGGCTTTACTGTTCAACTATCCTTAGTAATCCATGGCTTTCCGATGGCTACACTTTGGTTATAGCTTCTATCTGGTGCAGCAGTCAAAAATATTGCGGATCACCCCTGCCGACTCAAATTTCTCTTGGAGTCTCCTTACATTGGATGGGAACAATATTCTTGCTGGTTAGATCCTTGATCTCCTCTCTTACATTCAGTGTGATGAAGATCTCAGTCAATGATGTTTCTGAAACCTTAACAACAAAAGGTGCTAGTCAACCTTATGAAGCCATATTTGTGTCATCAAAAACTAAGAAAAGTGATGCATGTGATCCACTAGTTGTAATTCTTCATGGGGGACCACACTCAGTCTCATTGTCAAGCTTTTCAAAGCCATTGGCTTATCTTTCTTCACTTGGATATAGCTTGTTAATTGTGAACTACAGAGGATCATTAGGATTTGGTGAGGAAGCCTTGCAATCTCTTCCAGGAAAAATTGGATCTCAGGATGTCAACGATGTACTCACTGCTATTGATCACATCATTAACTTGGGACTTGCCAGTCCTTCAAAGATTGCAGTCCTCGGTGGCTCACATGGTGGCTTTCTGACAACCCACTTAATTGGCCAGGCACCGGAGAAATTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTTCACTGATGGTTGGTACAACTGATATCCCTGAATGGTGCTATGTGGAGACCTATGGAACCAAGGGGAGAGATAAGTTTACTGAAGCACCTTCAGCAGAGGATCTAACACTATTTTATAGCAAATCTCCTATTGCACACCTCTCAAAGGTAAAAACACCCACGCTTTTCCTACTAGGTGCCCAAGATCTCCGTGTCCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAAGGAGAAAGGAGTACAGGTTAAAGTCGTTGTGTTTCCAAATGATGTTCATGGAATTGATAGGCCACAATCTGACTTTGAAAGCTACCTTAACATTGCAATGTGGTTCAACAAGTATTGCAAATGA	2055	0.4433	MACGRVAFSVIGLSISLACTSALPLPPNLFSRNSLSLPSSSNPHPNYLSSTSTPLTASRRFSFSAMDKQDAAAAEQDYAVHSTLLQEFNAISTIDKAWLFKSHTHTGSASSHAMFCVSQPNLLVNKRKKSIVSATILTQNDGSSVAFHWAPFPIEMSGVSTMVPSPSGSKLLIVRNPETEAYVAEEPAPAKPTFNDLGDYKKAGSSDQDCGTWKGHGEWEEDWGETYAGKRPPALFVINVNRPCALYAVKAPHHNSKANETEIQSTGDVQAVNLTQTISSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSFHRIDWPEDTKLYQSAKIHEVIPVVLFAEDGSFPGLYCSTILSNPWLSDGYTLVIASIWCSSQKYCGSPLPTQISLGVSLHWMGTIFLLVRSLISSLTFSVMKISVNDVSETLTTKGASQPYEAIFVSSKTKKSDACDPLVVILHGGPHSVSLSSFSKPLAYLSSLGYSLLIVNYRGSLGFGEEALQSLPGKIGSQDVNDVLTAIDHIINLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLSLMVGTTDIPEWCYVETYGTKGRDKFTEAPSAEDLTLFYSKSPIAHLSKVKTPTLFLLGAQDLRVPISTGLQYARALKEKGVQVKVVVFPNDVHGIDRPQSDFESYLNIAMWFNKYCK	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed8g0144	684	SUPERFAMILY	DPP6 N-terminal domain-like	155	351	-	-
	Aed8g0144	684	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	75	180	IPR045550	-
	Aed8g0144	684	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	181	241	IPR045550	-
	Aed8g0144	684	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	19	-	-
	Aed8g0144	684	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	68	180	-	-
	Aed8g0144	684	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	181	241	-	-
	Aed8g0144	684	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	402	684	-	-
	Aed8g0144	684	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	241	375	-	-
	Aed8g0144	684	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	68	180	-	-
	Aed8g0144	684	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	181	241	-	-
	Aed8g0144	684	Pfam	Prolyl oligopeptidase family	467	683	IPR001375	GO:0006508\|GO:0008236
	Aed8g0144	684	Pfam	WD40-like Beta Propeller Repeat	281	304	IPR011659	-
	Aed8g0144	684	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	241	375	-	-
	Aed8g0144	684	ProSitePatterns	Prolyl endopeptidase family serine active site.	512	542	IPR002471	GO:0004252\|GO:0006508
	Aed8g0144	684	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	402	684	-	-
	Aed8g0144	684	Gene3D	alpha/beta hydrolase	424	682	IPR029058	-
	Aed8g0144	684	SUPERFAMILY	alpha/beta-Hydrolases	445	683	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed8g0144	Aed-Chr8	1239615	1249431	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed8g0144	451	667	Carbohydrate Esterase	AT5G36210	27.650	3.30e-19	90.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed8g0144	K01303		-	jre:108989467	798.89