Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0141 ATGAGAAGTTGGTGCAAGATGCATCATATATCTGCTCTCTTTCTAATTATCTTCTTCTTCTTCTTCATCCATTGCAATGCTCAAACAGAACGACAACGGAACAACACGGGGTTCACGTGCAATTTCAACCGCACGTGCAGCAGCTACGCGTTCTACCGCGCGAGCGCTCCGAACTTGACCGACCTGGCTGCCATCGGAGACCTCTTTGAGGTGAGCCGGCTGATGATCTCAACCCCATCGAACATTTCGTCCCCTTCAACACCCTTAGTCCCAAGCCAACCCCTATTCATCCCCCTAACCTGCTCCTGCAACCCCGTGAACTCGACCTTGGGGTCAATCTCCTACGCCAACATCTCCTACACCATCAAATCCGGCGACACCTTCTTCCTCGTCTCCACCAACTCCTTCCAGAACCTCACCACCTACCCCTCCGTTGAGGCCGTCAACCCCTCCCTCCTCGCCACCAACCTCTCCATCGGCCAGGTAACCATCTTCCCCATCTTCTGCAAATGTCCCGACAACAACACCAACACCAACACCAACTACATGATCTCCTACGTTGTCCAGCCCGAGGACAACATCTCCTCCATCGCTTCCACCTTCGAGGCTCAGGAACAATCCATCATTGACGCCAACGGCGACACTCTGCACGACTATGACACCATCTTCGTTCCGGTGTCGCGGCTGCCGGCTCTGTCGCAGCCTGAGGTGGTTCCTTCCGCGCCGCCGCCGACGACGACAACAAGTGGGGATAGGACGGGGACTGTTAGAGGGCTGGGGATTGGGTTGGGGGTTGTAGGGTTGTTGTTGATTTTGGTGAGTGGTGTGTGGGTTTATAGAGAGGTTGTGATGAAGGGAGTGGTACTGAGAGATGAGGAAGATGTGAAACAGAGGAAAAACGTGTATTTCGGAGGAGGGAAACAGGAGAAGGATATGAATGTCAATTTGATGGCAAATGTGTCCGATTGTTTGGATAAGTATAGGGTTTTTACCATTCAGGAACTGCTGGAGGCCACCGATGCCTTTCATCAGACTTGCTTGATTCAGGGTTCGGTCTACAGAGCTCAGATTGGTGGATCGCTCTTTGCCATCAAGAAGATGAAGTGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGGCTACATTGCCCCTGAATATCTGGCTGATGGTGTGGTCTCTACAAAGATGGATGTGTTTGCTTTTGGTGTTGTGTTGCTTGAACTAATTTCTGGGAAGCAAGCCATTGATGAGAAAGGGAATCTGTTGTGGGCAAGTGCCATCAAAAGTTTTGAAGTGGAGAATGAGCAAGAGAAGGTTAGGAGACTGAAGGAATGGCTAGATAAGGATATTTTAAGGGAGACATGCTCAATGGAAAGTTTGATGGGATTTCTGAATGTTGCAATATCTTGCTTTCATAGAGAGCAGTCAAAGAGGCCCAGCATAATGGATATTGTCTATGCACTAAGTAAAGCTGAAGACATGGGCTTTGAAATGTCAGACGACGGGATTGGTTCCCCACGGCTCATTGCTAGGTGA 1539 0.4997 MRSWCKMHHISALFLIIFFFFFIHCNAQTERQRNNTGFTCNFNRTCSSYAFYRASAPNLTDLAAIGDLFEVSRLMISTPSNISSPSTPLVPSQPLFIPLTCSCNPVNSTLGSISYANISYTIKSGDTFFLVSTNSFQNLTTYPSVEAVNPSLLATNLSIGQVTIFPIFCKCPDNNTNTNTNYMISYVVQPEDNISSIASTFEAQEQSIIDANGDTLHDYDTIFVPVSRLPALSQPEVVPSAPPPTTTTSGDRTGTVRGLGIGLGVVGLLLILVSGVWVYREVVMKGVVLRDEEDVKQRKNVYFGGGKQEKDMNVNLMANVSDCLDKYRVFTIQELLEATDAFHQTCLIQGSVYRAQIGGSLFAIKKMKWNAYEELKILQKGYIAPEYLADGVVSTKMDVFAFGVVLLELISGKQAIDEKGNLLWASAIKSFEVENEQEKVRRLKEWLDKDILRETCSMESLMGFLNVAISCFHREQSKRPSIMDIVYALSKAEDMGFEMSDDGIGSPRLIAR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0141 512 Gene3D Transferase(Phosphotransferase) domain 1 357 502 - -
Aed8g0141 512 Pfam Protein kinase domain 379 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0141 512 Gene3D LysM domain 183 225 IPR036779 -
Aed8g0141 512 MobiDBLite consensus disorder prediction 234 253 - -
Aed8g0141 512 CDD LysM 118 162 IPR018392 -
Aed8g0141 512 CDD LysM 184 224 IPR018392 -
Aed8g0141 512 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 380 510 - -
Aed8g0141 512 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 380 - -
Aed8g0141 512 SUPERFAMILY Protein kinase-like (PK-like) 379 490 IPR011009 -
Aed8g0141 512 Pfam LysM domain 186 224 IPR018392 -
Aed8g0141 512 PANTHER - 380 510 - -
Aed8g0141 512 PANTHER - 13 380 - -
Aed8g0141 512 SMART LysM_2 119 166 IPR018392 -
Aed8g0141 512 SMART LysM_2 185 225 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0141 Aed-Chr8 1222882 1225748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0141 380 491 Receptor kinase-like Gene Family AT2G23770 36.607 2.39e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aed8g0141 Pkinase 4.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0141 - - gmx:100802872 474.552