Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0140 AAAACACTCTTTATTTCCAACTTTCCTATAAAACAACCTTGCATTTCCCACATTAACACCCACACAAACTGTTGCAATTTTCATAGAAAGAAAGTATTAAGATTTTGGCTAGCTTATCGCCTGAGAATGATGGAGAATGATCTGAACCTCAAGGCAACGGAGCTAAGATTGGGGTTGCCAGGAACAGAGGAAAAGCATGCTATTAGTATTAGTATTAGAAACAACAACAAAAGGCAAGTGCGTGAAACTTCTCAAGAGTCTGTTTCCATTTCGAAGACCTCACTTGATCAACATGTGGACAGTGATTCAGCCCCTCCTGCCAAGGCAAAGATAGTGGGGTGGCCACCAATAAGATCTTACAGGAAAAACAGCATGCAGGAGGGGGATGGGATCTATGTGAAAGTGAGCATGGATGGAGCCCCTTACCTCAGAAAGATTGACTTGAAACTCTATAGGGGCTATCCAGAACTACTCATAGCTTTAGAGACCATGTTCAAGTTGACAATAGATGACTATTCTGAAAGAGAGGGTTACAAGGGCTCTGAATATGCACCTACATATCAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCATGGGACAGCATGTTTATGTCTTCCTGCAAAAGACTAAGAATCATGAAAGGCTCAGAAGCCAGAGGGTTGGGCTGTGGTGTATGA 687 0.4265 KTLFISNFPIKQPCISHINTHTNCCNFHRKKVLRFWLAYRLRMMENDLNLKATELRLGLPGTEEKHAISISIRNNNKRQVRETSQESVSISKTSLDQHVDSDSAPPAKAKIVGWPPIRSYRKNSMQEGDGIYVKVSMDGAPYLRKIDLKLYRGYPELLIALETMFKLTIDDYSEREGYKGSEYAPTYQDKDGDWMLVGDVPWDSMFMSSCKRLRIMKGSEARGLGCGV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0140 228 Pfam AUX/IAA family 75 225 IPR033389 -
Aed8g0140 228 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 47 225 IPR003311 GO:0005634|GO:0006355
Aed8g0140 228 MobiDBLite consensus disorder prediction 79 100 - -
Aed8g0140 228 Gene3D - 125 228 - -
Aed8g0140 228 MobiDBLite consensus disorder prediction 79 107 - -
Aed8g0140 228 PANTHER AUXIN-INDUCED PROTEIN 47 225 - -
Aed8g0140 228 SUPERFAMILY CAD & PB1 domains 124 217 - -
Aed8g0140 228 ProSiteProfiles PB1 domain profile. 130 218 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0140 Aed-Chr8 1217857 1220864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0140 133 224 B3 DNA Binding Superfamily AT2G46530 36.957 5.97e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aed8g0140 AUX_IAA 1.6e-48 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0140 K14484 - gmx:100800212 319.316