Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0133 ATGACGTTTACATCTTCTTGTCTTGAGCAGGCCAATTCTAACATGCATAAAAGAAAGTCTACCTTGATTAGTGATGGACATACTTCTGCATTTAAGAAGAGGATATCAAGAAGAGAAAGCTATGTGGACTCTCTTGAAAGAAAGGAGCAACCTCACAAGGGTCTGGTCACAAAAGATGCCGATGAAAAGAATAAGCCTTCTACTCGACATTTCATCCATGGATATCACTTGACCCAAGGAACGATGAACCATGGAATGGAAGACTATATTTTTGCTCAACACAAGAATCTCGAGGGTTATGACCTAGGGTTATATGCAATATTTGATGGTCATTCTGGTCATGAAGTTGCAAAATACTTGCAAAGCCATCTATTCAAAAATATACTGAATGAGCCTGATTTCTGGGTCAATCCAGTGCATGCTGTGAAGAAAGCATGTAAAGATATAGATGATGAGATTTTAGAAAACATAGCTGCTTCGCGTGGAGGATCAACAGCTGTTGCAGCAATACTGATTAATGGAATAAAGCTTCTGGTAACTAATGTTGGTGATTCTCGAGCAATATCATGCAAAAATGGTCTAGCAAAGCCACTGACTGTGGATCATGAACAAGAGAAGGAAAAATATCTTATTGAGAGCAGAGGAGATTTTGTGTCTAAGAAACCAGGGAATGTTCCAAGAGTGGATGGCCAATTAGCAATGACTCGATCATTTGGTGATGGAACACTAAAGGAGCACATTACAGCAGAACCAGATGTGACGATTCGGAAGATTGATCAAGACACTGAATTCATCATTTTGGCAAGTGATGGTCTGTGGAAGGTGATGACAAATCAAGAGGCTTGTGACTGTATCATGGATGTGGATGATGCGCATAAAGCATCCAAGAAGTTAGTTGAAGAAGCTAAATCTATGGGAAGCTATGATGATATTTCATGCATAGTTATTATGTTCTAG 957 0.3929 MTFTSSCLEQANSNMHKRKSTLISDGHTSAFKKRISRRESYVDSLERKEQPHKGLVTKDADEKNKPSTRHFIHGYHLTQGTMNHGMEDYIFAQHKNLEGYDLGLYAIFDGHSGHEVAKYLQSHLFKNILNEPDFWVNPVHAVKKACKDIDDEILENIAASRGGSTAVAAILINGIKLLVTNVGDSRAISCKNGLAKPLTVDHEQEKEKYLIESRGDFVSKKPGNVPRVDGQLAMTRSFGDGTLKEHITAEPDVTIRKIDQDTEFIILASDGLWKVMTNQEACDCIMDVDDAHKASKKLVEEAKSMGSYDDISCIVIMF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0133 318 SMART PP2C_4 62 316 IPR001932 -
Aed8g0133 318 CDD PP2Cc 71 316 IPR001932 -
Aed8g0133 318 SUPERFAMILY PP2C-like 69 318 IPR036457 -
Aed8g0133 318 Gene3D - 70 318 IPR036457 -
Aed8g0133 318 PANTHER ALPHABET, ISOFORM E-RELATED 34 318 - -
Aed8g0133 318 MobiDBLite consensus disorder prediction 41 67 - -
Aed8g0133 318 ProSiteProfiles PPM-type phosphatase domain profile. 72 318 IPR001932 -
Aed8g0133 318 PANTHER PROTEIN PHOSPHATASE 2C 28-RELATED 34 318 - -
Aed8g0133 318 MobiDBLite consensus disorder prediction 1 23 - -
Aed8g0133 318 Pfam Protein phosphatase 2C 84 311 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0133 Aed-Chr8 1097911 1102793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0133 69 318 PP2C-type Phosphatase Gene Family AT4G28400 56.972 5.25e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0133 - - gmx:100814772 491.115