Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0123 ATGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGGAAGAAGACTCCACTACTCTTCCCCTTACCAGAACACGATGAAATCGTTCTGCCGATGACCCCTTCGGAATTCAAGGAGCGTCTCATCTTCGGTCCCGCTCCTTCCTCTGCTTCCCCAAGAGACCCTTCACCTCTCTCTGTCTCTGATGCCTTCACACTCAGCTTCAATTCCCCTAAATGTTCCTCTTCTACCTCACCGCCACTATTTGATTCCCAACAACAACAACAACAACTCAGCTCTTGGCTCCTTGACCCCAATTACGAGTCATGGCGCAAAACAAACCTCCACCGCTCCAAAACCGCGCCTGCCATGGCGGTTATCAGCGATTTCAACGGCCACCCCACCGTCGCAAGACCCCAATTCGCAAGCCAGAGTATTGTGCACCAGGGTGTTATTCTTCTTGCTCTCTATTTAGCATTAGGGGTTGTTATTTATTGGTTCAATCGTCATAATTTTACAGCTACAGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATAGGGTATGGTGACATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATAATGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTCCTTGATTTGCAGGAGAGTCACATGTTGGATGCTGTCAAGGGGAGGAGGGGTGAGAAGGATGGGAAGTCATATATAATTGATGTTAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTCGCTTTGGGTGTTGTGGTGATTTGTATTGGGGTAGGTGTTGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGGTGGACTCGTTTTATCTTTCAGTCATGTCGGTTACCACGGTTGGGTATGGAGACCATGCGTTCAAGACCATGCACGGTCGGATTTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTGGCTGTGGCCCGGGCATTCCTCTTTTTGGCTGAGGCCAGGGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTGAGTCATCCTCAGGCGTGGTTGGGAAACAGTGGCAATAGATCGGTGGGAATATTATTAATTTGTTGA 1191 0.4744 MEKEPLLPYFSPRKKTPLLFPLPEHDEIVLPMTPSEFKERLIFGPAPSSASPRDPSPLSVSDAFTLSFNSPKCSSSTSPPLFDSQQQQQQLSSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNGHPTVARPQFASQSIVHQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESHMLDAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLFLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSHPQAWLGNSGNRSVGILLIC 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0123 396 SUPERFAMILY Voltage-gated potassium channels 138 225 - -
Aed8g0123 396 Pfam Ion channel 270 337 IPR013099 -
Aed8g0123 396 Pfam Ion channel 146 225 IPR013099 -
Aed8g0123 396 PANTHER TWO-PORE POTASSIUM CHANNEL 3 86 377 - -
Aed8g0123 396 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 86 377 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed8g0123 396 Gene3D - 137 236 - -
Aed8g0123 396 SUPERFAMILY Voltage-gated potassium channels 254 358 - -
Aed8g0123 396 PRINTS Two pore domain K+ channel signature 302 311 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed8g0123 396 PRINTS Two pore domain K+ channel signature 182 210 IPR003280 GO:0005267|GO:0016020|GO:0071805
Aed8g0123 396 Gene3D - 244 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0123 Aed-Chr8 1043259 1048401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0123 4 379 Ion Channels AT4G18160 63.776 1.97e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0123 K05389 - gmx:100787238 673.315