Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0116 ATGTTGTCCCTAAAGATTAGTTTGACTATAGGCATAGTCCTCCTTTCCATTGTATCCATGGTTTCCAATGCTGAAACAAGCTTGGAAGTTGAAATTGAAGCTTTGAAAGCTTTCAAGAACTCCATCAATGCTGACCCAAATGGGGCTCTTGCAGATTGGGTTGACACACACCACCACTGCAACTGGTCTGGCATTGCATGTGATCCATCTTCAAATCATGTCATTTCAATTTCTCTGGCTAGTCTTCAGCTCCAAGGGAAGATTTCACCTTTCCTTGGAAACATTTCTGGTCTTCAGGTTCTTGATGTAATGTCAAACTCATTCACTGGCTACATTCCTTCTCAGCTCAGTCTTTGCACTAACCTTTCTGAACTATCGCTTTTTGACAATTCTTTATCAGGTCCTATCCCTCCTGAATTAGGAAACCTTAAAAGCCTTCAGTATTTGGATTTAGCTAACAACTTCTTGAATGGAAGCCTCCCTGACAGCATATTCAACTGCACTTCTTTGTTGGGTATTACTTTTAGTTTCAACAACCTTAGTGGCAAAATTCCATCAAACGTTGGGAATCCAGTTAACCTCATACAGATTGAAGGTTTTGGAAATAGCTTTGTAGGGTCTATACCTCTTTCTGTAGGTCAGTTAGGAGCTTTGCGAGCTCTTGATTTCAGCCAAAACAAGTTATCAGGTGTAATACCTAGAGAGATTGGAAATATGACGAATTTAGAATACCTTCTATTGTTCCAAAATTCCTTCAGTGGGAAAATCCCTTCCGAGCTTGCTAAGTGTAGCAAGCTTTTACACCTTGAGTTATATGAAAATCAGTTTATTGGAAGCATTCCTCCTGAGCTAGGAAATTTAGTTCAGTTGGAGACTTTGAGGTTACATAGCAATAACTTGAGTTCCACCATTCCATCTTCCATATTCCAGTTGAAATCATTAACACATTTAGGACTAGCAGAGAATATATTGGAGGGAACAATATCATCTGAGATTGGATCTTTGAGCTCCTTGAGAGTTCTAACCCTGCATTTAAATAAGTTTACTGGGAAGATCCCTTCATCAATAACAAACTTGACAAACTTGACATATCTGTCAATGAGCCAGAATCTCCTTTCAGGTGAACTTCCTTCAAACTTGGGCATGCTTCATAATTTGCAGTTTCTTGTTTTGAGCGCCAACTACTTCCATGGGTCCATTCCCTCTAGCATTACCAATATTACTAGTCTAGTAAATGTAAGTTTGTCTGCTAATGCTTTAACTGGAAATATTCCTGAGGGTTTTTCGAGGTCGCCTAATCTTACTTTCATGTCTCTTGCATCCAACAAAATGACTGGGGAAATCCCAGATGACCTCTATAACTGCTCAAATCTTAGCACTCTAAGTTTGGCAATGAACAACTTCAGTGGATTGATAAAATCAGGTATCCAGAACCTCTCTAAACTCATTCGCCTGCAGCTGAATGCGAATTCTTTCATAGGACCAATTCCACCAGAGATTGGAAACTTGAATCAACTCGTCAGTTTATCCCTTTCTGAAAATAAGTTTTCCGGTCAAATTCCTCCAGAACTGTCCAAACTTTCTCACCTTCAGGGGCTCACTCTATATGCCAATGAATTAGAAGGTAGTATACCTGATAAGCTCTCAGAATTAAAACAACTAACCGAACTTATGCTGCATCAAAACAAGTTGGTTGGTCAAATACCTGATTCTCTCTCAAAGCTTGAGACGCTTTCATACTTGGACCTTCATGGCAACAAACTCAATGGGTCCATTCCGAGAAGCATGGGGAAGCTTAACCAGCTTTTAGCATTGGATCTCTCTCACAACCAGCTCACAGGATCAATTCCCAGAGATGTCATTGCACACTTTAAAAACATGCAGATGTATCTTAACCTTTCTTACAACTACTTGGTCGGAAATGTTCCAACTGAATTTGGCATGATGGAAATGATACAAGCTATTGATATTTCTAACAATAATCTTTCAGGTTTCATTCCAAAAACACTATCTGGGTGCAGAAATCTGTTCAATCTTGATTTTTCAGGAAACAATATTTCAGGTCCTATTCCTGCAGAAGCTTTTAGTCACATGGACTTGATTGAAAGCTTAAACCTCTCAAGAAATCATTTAGAAGGTGAAATCCCTGAAATATTGGCAGAACTTGATCATCTTAGTTCCCTAGATCTTTCTCAGAATGAGATGAAGGGAACTATTCCTGAGGGCTTTGCCAACCTTTCCAACTTGGTGCATCTCAACCTTTCCTTCAATCAACTTGAAGGTCCTGTACCCAAGACCGGAATATTTGCACACATCAATGCATCTAGTATAGTGGGAAACCAGGACCTTTGTGGAGCTAAGTTCCTATCACCATGCAGAGAGACAAAACATTCACTATCCAAGAAGAGCATATCTATTATTGCTTCACTTGGATCTCTTGCTATACTTCTACTTCTAGTGATTCTAGTTCTCTATCAAGGCACCAAACTCTGCAATTCTAAGGAAAAAGATGTAAGTGTAAATCATGGACCAGACTACAGTTCAGCATTGACACTGAAAAGGTTCGATCCAAAGGAGTTAGAGATTGCCACTGGTTTTTTCAGCGCGGACAGTATCCTTGGTGCTAGCGGTTTGAGCACAGTTTACAAGGGGAAAATGGAAGATGGTCAGGTAGTCGCCATAAAAAGATTGAATTTGCAGCAATTCTCTGCAAATACTGACAAGATGTTCAAGAGAGAAGCCAACACCTTGAGCCAGATGAGACATAGGAATTTGGTCAAGGTACTTGGATATGCCTGGGAGAGTGGGAAAATGAAGGCTTTGGTTCTAGAGTACATGCAGAATGGGAATTTGGATAGCATCATACATGGAAAAGGGATAGATCAGTCTGTGATCTCCAGGTGGACATTATCTGAAAGAGTCCAATTTGCCTACATGAGGAAAGTAACCACTAAAGCGGATGTGTTCAGCTTTGGTATCATAGTAAAGGAGTTTCTAACAAAAAGAAGGCCAACAGGACTCTCAGAAGAGGATGGTTTGCCAATCACTTTGCGTGAAGTAGTGGCAAAAGCTCTTGCAAATGGAATAGAACAACTTGTCAATATTATGGACCCTTTGTTGAACTGCAATGTTACAAAAGAACATGATGAAGTGCTGGCAGAGCTCTTTAAGTTATCCCTGTGCTGCACCCTCCCTGATCCTGAACACCGACCCAATACAAATGAGGTGCTATCTGCTCTTCTGAAGCTTCAGACAGCACTGTCTTTTTAA 3270 0.4018 MLSLKISLTIGIVLLSIVSMVSNAETSLEVEIEALKAFKNSINADPNGALADWVDTHHHCNWSGIACDPSSNHVISISLASLQLQGKISPFLGNISGLQVLDVMSNSFTGYIPSQLSLCTNLSELSLFDNSLSGPIPPELGNLKSLQYLDLANNFLNGSLPDSIFNCTSLLGITFSFNNLSGKIPSNVGNPVNLIQIEGFGNSFVGSIPLSVGQLGALRALDFSQNKLSGVIPREIGNMTNLEYLLLFQNSFSGKIPSELAKCSKLLHLELYENQFIGSIPPELGNLVQLETLRLHSNNLSSTIPSSIFQLKSLTHLGLAENILEGTISSEIGSLSSLRVLTLHLNKFTGKIPSSITNLTNLTYLSMSQNLLSGELPSNLGMLHNLQFLVLSANYFHGSIPSSITNITSLVNVSLSANALTGNIPEGFSRSPNLTFMSLASNKMTGEIPDDLYNCSNLSTLSLAMNNFSGLIKSGIQNLSKLIRLQLNANSFIGPIPPEIGNLNQLVSLSLSENKFSGQIPPELSKLSHLQGLTLYANELEGSIPDKLSELKQLTELMLHQNKLVGQIPDSLSKLETLSYLDLHGNKLNGSIPRSMGKLNQLLALDLSHNQLTGSIPRDVIAHFKNMQMYLNLSYNYLVGNVPTEFGMMEMIQAIDISNNNLSGFIPKTLSGCRNLFNLDFSGNNISGPIPAEAFSHMDLIESLNLSRNHLEGEIPEILAELDHLSSLDLSQNEMKGTIPEGFANLSNLVHLNLSFNQLEGPVPKTGIFAHINASSIVGNQDLCGAKFLSPCRETKHSLSKKSISIIASLGSLAILLLLVILVLYQGTKLCNSKEKDVSVNHGPDYSSALTLKRFDPKELEIATGFFSADSILGASGLSTVYKGKMEDGQVVAIKRLNLQQFSANTDKMFKREANTLSQMRHRNLVKVLGYAWESGKMKALVLEYMQNGNLDSIIHGKGIDQSVISRWTLSERVQFAYMRKVTTKADVFSFGIIVKEFLTKRRPTGLSEEDGLPITLREVVAKALANGIEQLVNIMDPLLNCNVTKEHDEVLAELFKLSLCCTLPDPEHRPNTNEVLSALLKLQTALSF 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 1 118 - -
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 366 975 - -
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 164 294 - -
Aed8g0116 1089 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
Aed8g0116 1089 Pfam Leucine rich repeat 719 759 IPR001611 GO:0005515
Aed8g0116 1089 Pfam Leucine rich repeat 653 711 IPR001611 GO:0005515
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 88 278 IPR032675 -
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 624 800 IPR032675 -
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 529 618 IPR032675 -
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 25 87 IPR032675 -
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 290 372 - -
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 976 1084 - -
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 120 164 - -
Aed8g0116 1089 SMART LRR_typ_2 722 745 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 746 771 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 599 623 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 143 167 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 215 239 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 503 527 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 335 358 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 287 311 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 551 575 IPR003591 -
Aed8g0116 1089 SMART LRR_typ_2 359 383 IPR003591 -
Aed8g0116 1089 Gene3D Transferase(Phosphotransferase) domain 1 964 1088 - -
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 366 975 - -
Aed8g0116 1089 SUPERFAMILY L domain-like 383 492 - -
Aed8g0116 1089 Pfam Protein kinase domain 870 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 976 1084 - -
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 164 294 - -
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 290 372 - -
Aed8g0116 1089 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2 120 164 - -
Aed8g0116 1089 SUPERFAMILY RNI-like 76 397 - -
Aed8g0116 1089 SUPERFAMILY Protein kinase-like (PK-like) 845 1083 IPR011009 -
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 377 526 IPR032675 -
Aed8g0116 1089 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Aed8g0116 1089 Pfam Leucine Rich Repeat 145 167 IPR001611 GO:0005515
Aed8g0116 1089 Gene3D Ribonuclease Inhibitor 279 376 IPR032675 -
Aed8g0116 1089 ProSiteProfiles Protein kinase domain profile. 867 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed8g0116 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 118 - -
Aed8g0116 1089 PRINTS Leucine-rich repeat signature 602 615 - -
Aed8g0116 1089 PRINTS Leucine-rich repeat signature 722 735 - -
Aed8g0116 1089 Gene3D Phosphorylase Kinase; domain 1 830 945 - -
Aed8g0116 1089 SUPERFAMILY RNI-like 473 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0116 Aed-Chr8 969680 973830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0116 24 1084 Receptor kinase-like Gene Family AT5G46330 47.898 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aed8g0116 Pkinase 4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0116 K13420 - gmx:100817960 1678.3