Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0087 ATGAAGGAAAACAACAAATCATCAGCACCTAAAATGCTTAACAGGAACTGGGTTTTAAAGCGTAAGCGGAGAAAACTTCCTTTGGGACTAGATCAGTCATCTGGTGGTAAAGAGCAATCCAATGGTAAAGAAGAAAATTCAATAACATCTGAATCTTCTAGAAATGCTTCTGCTAAACGTGTACTAAAGACTGAAGTAGCTACTGATCAAATTTCATCCAAGAAGAAAGGAAATGATGGGTATTACTACGAATGCGTGATCTGTGATGTTGGTGGAAACTTATTGTGCTGTGACAGCTGTCCCCGAACTTATCATATACAATGTCTCGATCCTCCTCTTAAGCGCATCCCTAATGGGAAGTGGCAATGTCCAAGTTGCTTTGAAGGAAATGATCAACTAAGGCCCACAAACCACCTGGATCCAATTTCAAAACGAGCAAGGACAAAGATTGTCCCTACAAAATCAAAAGATGAAGTTAGCTCACTTAACCTTGAAAAAGTTTTTGGAACTAAACTTATTTCCAAGAAAAGGTCCTCAAGCAAAGGAAAACCTATTTCAACTATGGGAGTCAAATTCTTTGGAAAGAAATTACTGTCCTCCCCAGCTGATGAAACTTGTAGCAGCAAACCTATTGACCCATCTCTTGGGAGTCCTATGGAAGGAACTTTGTCAGGTGTGGATGCTGATGAAAAGAAATTGAGCTTGTCCCCAACAGAATCCCCTATGGAAAGGAAGTCAACTTCACCAGCCAAGGAAGATTTACCACCCTCTAAAATTACTAATTTAGAAGCAGATGATGAACAGCTGGAGGGGAAGACTGATTTATCTTGTAATAAGATTCCTTTAAGGAAAACACTTGTTCTTGCTATTGCTGCTAGTGGAGAGGAAGTTAGAAAAAGGAAGAATAAAGTTGTTAATGATAATACTAGTCAAAAGAAACAAAAGACTGAAAAGGGGAAAAAAATTGTCAATCCTTCTTCTACAAAGTCCAAGTCTGGGAATAATAAAGTACACAAGAAGCAGAAGTCTATAGCCCATAGCATTTCTGCATCTGTATCAAAAGAGGATGTTGGAAACAAGAATTCTAATGCTCAGCAGAAAGATGAGAAGATCTCTCAGGTAATGAAAGATACACCAAGTGAAGTTGATAAAGCACGGAATCTTGTGCACGAAACTTTGTTGCATGAAGACAGTGCTATTGCTGAGTCTCTGCAGGTTGATCGCGTTCTAGGGTGTCGAATTCATGGTGAGAATGCAAATTCATCACGACACTTGTCCTTGAATGTTGCAGGTGACTCACTTTCTGGTGATCTGGTAATATCAGAAAATCAGACCAGACTACTAGAGGATAATTCTGCTTGTGCTAATGATTTGGATGTTGAATCAACTGAAAATCATATTGCTGATTGTCAAGATGTCAAGAGTTCTGATGAAGAAGGAATACTGAAAAACACTGATAGAGTGGAAAGGATTCATGTGTACAAAAGATCAATAACAAAAGAAAGTAAGAAAGGAAATCCTGTTGATTCATTGAGTAAATCCACTGATGATTTAGGTTCCTGTGGCAAGGCGGGTAAAGATCAGGATGATTCTGCTGTATCTGCTGAACAGTTGGAAAAACCAATCGACAAGGTGGAGACAGAGGAGATCATTAATGTTGCTTTAAGAAGTGAGGATAACAGTGAGAGTCCAAAAAATTGTGAAGTGCATCTCTCTTTTGAAACAAAAAAAAAAGAAATGAATGCAGAGAAGGGAATAAGTGGCAGTATTGATGATAAGGCTCAGGATGCTAACATAGTTGAATGTGCAGGCCCAAATGGAGAGGAAGTTTTCTATGAATTCTTAGTTAAATGGGTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAGTCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAGTATGGGATGGCAATAATTAATATCTGTGAGGATCGTTGGAAGCAGCCTCAGCGGGTGCTTGCCCTTCGAACTTCCAAACATGGAACATCTGAAGCATTTGTAAAATGGACTGGACTGCCTTATGATGAATGCACTTGGGAAAGTTTGGATGAACCAGTGCTTCAAAGTTCTTCTCATTTGATTACACTTTTTAATAAGCTTGAAACCCTCACTCTTGAAAGGGATTCATCAAAGGAAAATTCAACTAGGAAAAGCAGTGACCGTCAAAATGATATTTTTAATCTTACAGAACAACCTGAGGATCTAAAAGGTGGTTCTTTGTTTCCCCATCAGCTTGAGGCACTGAACTGGTTGCGTAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAGTATCTGCTTGTGCTTTTATTTCATCATTGTATTTTGAATTCAAAGCTTCACTTCCTTGCTTGGTCTTGGTACCTCTTTCTACAATGCCTAATTGGCTTGCTGAGTTTTCACTATGGGCTCCAAATGTGAATGTTGTAGAATATCATGGCTGTGCTAAAGCAAGAGCCATAATTCGCCAGTATGAATGGCATGCAAATGATTCAAGTGGATTGAATAAGAAAACAGAAGCCTATAAATTTAATGTGCTTTTAACTACATATGAAATGATTCTTGCTGATTCTTCTCATTTGCGTGGAGTTCCTTGGGAAGTTCTTATTGTTGATGAGGGCCATCGACTGAAGAATTCAGGAAGTAAGCTTTTCAGCTTGCTAAATTCATTCTCTTTTCAACATCGTGTACTGTTGACAGGTACCCCCCTCCAGAACAACCTTGGCGAGATGTACAACTTGCTTAATTTCTTACAGCCAGCTTCATTTCCTTCTCTATCTTTATTTGAGGAGAGATTTAATGATCTTACAACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGGCTTAAAAAGGATGCCATGCAAAATATCCCCCCTAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATACTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGGGTTGCCCAACAATCTATGCTGAACATAGTGATGCAATTGAGGAAGGTCTGTAATCATCCATACCTCATACCAGGAACTGAGCCTGAATCTGGTTCTGTTGAGTTCCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTGCATTCTATGCTAAAGATTTTATATAGGGAAGGTCACAGAGTTCTTATTTTCTCACAAATGACCAAGCTTCTTGACATACTGGAGGACTATTTGACTATAGAATTTGGGCCTAAAACATATGAGAGAGTGGATGGATCTGTTGCTGTAGCTGATCGCCAGACAGCTATTTCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACTCGTTCTTGTGGACTAGGAATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAATCCCCATGCAGATATTCAAGCAATGAATCGAGCGCACAGAATTGGACAATCAAATAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGAATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGATCAGCTTTTTGTAAACAAGTCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAGTGGGGAACTGAGGAACTCTTCAATGATTCTCCTGGATTGAATGGGAAAGACACGAGTGAAAATAACAATAGCTGCAAAGATGAGGCAGTAGCAGATATAGAACACAAGCGTCGGAAGAGGACTGGTGGTCTGGGAGATGTATACAAAGATAAGTGTACTGATAGCAGCAGCAATATTCTATGGGATGACAATGCTATTTTTAAATTGCTTGATCGTTCAAACCTTCAAGATGGTTCAACTGATAATGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCTGTTAAGGCCCTTGAGTGGAATGACGAACCAACTGAAGAACATGTAGTGGGTGAATCTCCTCCTCTTGGGACTGATGATGTGTGCACACAAAATTCTGAGAAGAAAGAGGATAATGCAGTGAATGGCAATGAAGAAAATGAGTGGGACAAACTACTGCGTGTGAGGTGGGAGAAATATCAAAGTGAGGAGGAAGCAGTTCTTGGTCGAGGGAAGCGGCAGAGGAAATCTGTTTCTTATAGGGAAGTATATGCTCCACATCCTAGTGAAACAAGGAGTGAGAGTGGTGAAGAGGAAAAAGAGCGAGAACCAGAGCCTGAGCGTGAATATACACCAGCTGGACGGGCCTTCAGGGCAAAATATGGTAAACTCCGTGCTCGGCAAAAGGAACTACTTGCCCGGAAAAAAGCGATTAAAGAATCAAATCCTGCTGAGGGACTTCCAGGTAATGAGGTACTTACACATTTTCCAGCCATTGCAAAGGGTGGGGATCTAGGGGCTGGACCGATGCATTCAGTTCAGGAGGGGCCTTCTATCAACCTAGAGGACAGCAGATACACACAACTTTCAGAAGCTCAGAATAGCAACACTGACTCCTTACCAAGGATCGATAAGCTTTCAAGACATAAAATGAGCAGTCATTTTGATGCTTCTGTCAGTAATCTAGGTCGTTCTCTTCCTGACATTTTTCTTCCAAGTCACCCTAAAGGGGGGCTGAGCATGACAAACACTATGGCCACCAACAACTTGTTGCCTGTACTGGGACTTTGTGCTCCTAATGCTAACCAAATAGAATCATCAGAAAGTAATATTTCGAAGTTAAATTGGAGACAAAACAGACATGGTGGATCCAGACAAGAGTTTCCATTCAGTCTTGCCCCTTGCTCTGGGACATCCATGGATGCTGAGGTCAGAAGTAAGGAAATGGCAGCAAATGCCAAGCTGACAGATGCATCAACAGAAAATTTACAGCCATGTTTCAAAAATAGCATCCCTGATAACAGTCTTCCATTTGTTCCATTTCCACCCTCTGTGAAAGGAAAGGAATCTGATGCCTTTGAAAATTCAGGTGCTAGATTCTCTCATTTTCAGGAGAAGATGGCCTTGCCGAACCTGCCATTTGATGAAAGGTTGCTGGCCAGATTTCCTCTTACAACCAAGAGCATGCCAAATTCACATCTGGACCTCTTGCCCAGTTTATCTATTGGAGGAAGACTTGAATCTTTGAATGGATCTATGCAAGACCTTCCAACAATGCCAGCGTTGCCTAATTTCAAAATACCTCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTGCCCCCTACTTTAGGTTTGGGACAAAGGCCAACCACATTCTCATCTTTCCCAGAAAACCATAGGAAGGTGCTTGAAAACATAATGATGAGAACTGGATCTGGATCTGGATCAAGTAATTTATTGAAAAAGAAGTCAAAATCAGATGGGTGGTCTGAAGATGAACTTGATTCTCTCTGGATTGGCGTTCGTAGGCATGGAAGGGGTTATTGGGATGCTATGCTCAGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCAGAGGATTTATCAGTGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGGCCACCTTTTCCTGCACAAAGATCATCCAAGATGACTAAGTCTACTAAATCGGCACATTTTCCAATCTCTGATGGAATGATGGAAAGGGCCTTGCATGGGAGCAAATTTATTTTGCCACCAAAATTTCAAAACCATCTGACTGACATGAAATTAGGGATTGGTGATTCTGCATCTAGTCTCTCACATTTTAGTACATTGGACCGACCTAGTTTGCAAAATGATCACTTTGCATCTCTTCCATCTTGGAGTAATGATAAAAACAGATCAAAATTTCCTGATGGTTCTTCTGCTGAAACATTGGATAGACCAGGAACTTCTTCCAGTGTACTGACTGAAAGACCATTTCTGCTTAATTCTTTTGGAACCAGTACCTTGGGTTCTTTAGGCTTGAATTGCTCAGGTAGCCTTGATGCACATCAAAAGGAGGATGACCAAGGAAGCTCCAAGCGTGGAAAGTTGCCTGTACTTCTGGATGGATCACCCAATGATGTGCGTGATAATCACGCCAATGTAGGAAATGGTGAATCTACTAGTTCTGGATTGTTATCTAACCCCATTAGACCTGATCTTTTGCACTCCAAAGGAGAGGAAGTGGGTGGAAGCAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTGAGCTCCCCAGCCAAACTCCCTGATCCTGAACTTCCACCCACAGTATCAGCCATTGCTCATTCAGTTCGCCTGTTATACGGGGAAGATAAGCCTGCAATTCCTCCGTTTGTGATTCCAGGACCACCTCCCTCCCTACCAAAGGACCCCAGGTGTAGTGTCAAGAAGAAAAAGAAGAGAAGATCACACAAGTTCAATCGGGGTCTTCAAGATTTTGCTGGAAACGGTGCTTCAAGCTCAATTCCTCTGGGCCCGCCATTTCCTCTACTTTCTCATACAGCAGCTCTAGGAACTCAGCAGATTGAATCTGACCTTAACTTGCCTCCTCTAAATTTGAAAGTGGCAAACTCGTCACACTCTTCAAAAAAAGCAAGTTCAGGACTCTCTCCATCTCCTGAAGTGCTCCAGTTGGTTGCATCATGTGTTGCTCCTGGCTCCCATCTTCCATCTATCACTGGTACTTCAAATTTTCTTGACAGCAAGCTTCCATTGCCAAGGCCTGTTGGCAGAGCCAAATTCAAAGACTCAGAAGGTGTCTTCAGAAATAAGAATTCTAGGCAGGTTTCACCAAAAATTTGGTGTCCACCTCAAGAGCAAGAAGTACATGACCTTGATAGTGGAGATTCCAGCAAGACTCAGTCAGATCCCTCTCGGGTTGAACAGCCTGATGAAGTGGAGGTTTCATCTGAGGGAACTGTTTCAGACCATGCTGTGAGAGATCAGGAGACATAA 6996 0.4121 MKENNKSSAPKMLNRNWVLKRKRRKLPLGLDQSSGGKEQSNGKEENSITSESSRNASAKRVLKTEVATDQISSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHIQCLDPPLKRIPNGKWQCPSCFEGNDQLRPTNHLDPISKRARTKIVPTKSKDEVSSLNLEKVFGTKLISKKRSSSKGKPISTMGVKFFGKKLLSSPADETCSSKPIDPSLGSPMEGTLSGVDADEKKLSLSPTESPMERKSTSPAKEDLPPSKITNLEADDEQLEGKTDLSCNKIPLRKTLVLAIAASGEEVRKRKNKVVNDNTSQKKQKTEKGKKIVNPSSTKSKSGNNKVHKKQKSIAHSISASVSKEDVGNKNSNAQQKDEKISQVMKDTPSEVDKARNLVHETLLHEDSAIAESLQVDRVLGCRIHGENANSSRHLSLNVAGDSLSGDLVISENQTRLLEDNSACANDLDVESTENHIADCQDVKSSDEEGILKNTDRVERIHVYKRSITKESKKGNPVDSLSKSTDDLGSCGKAGKDQDDSAVSAEQLEKPIDKVETEEIINVALRSEDNSESPKNCEVHLSFETKKKEMNAEKGISGSIDDKAQDANIVECAGPNGEEVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMAIINICEDRWKQPQRVLALRTSKHGTSEAFVKWTGLPYDECTWESLDEPVLQSSSHLITLFNKLETLTLERDSSKENSTRKSSDRQNDIFNLTEQPEDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKASLPCLVLVPLSTMPNWLAEFSLWAPNVNVVEYHGCAKARAIIRQYEWHANDSSGLNKKTEAYKFNVLLTTYEMILADSSHLRGVPWEVLIVDEGHRLKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSLFEERFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLLHSMLKILYREGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVAVADRQTAISRFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDTSENNNSCKDEAVADIEHKRRKRTGGLGDVYKDKCTDSSSNILWDDNAIFKLLDRSNLQDGSTDNAEGDSENDMLGSVKALEWNDEPTEEHVVGESPPLGTDDVCTQNSEKKEDNAVNGNEENEWDKLLRVRWEKYQSEEEAVLGRGKRQRKSVSYREVYAPHPSETRSESGEEEKEREPEPEREYTPAGRAFRAKYGKLRARQKELLARKKAIKESNPAEGLPGNEVLTHFPAIAKGGDLGAGPMHSVQEGPSINLEDSRYTQLSEAQNSNTDSLPRIDKLSRHKMSSHFDASVSNLGRSLPDIFLPSHPKGGLSMTNTMATNNLLPVLGLCAPNANQIESSESNISKLNWRQNRHGGSRQEFPFSLAPCSGTSMDAEVRSKEMAANAKLTDASTENLQPCFKNSIPDNSLPFVPFPPSVKGKESDAFENSGARFSHFQEKMALPNLPFDERLLARFPLTTKSMPNSHLDLLPSLSIGGRLESLNGSMQDLPTMPALPNFKIPPEDLFRYNQQDRDVPPTLGLGQRPTTFSSFPENHRKVLENIMMRTGSGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGYWDAMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPAQRSSKMTKSTKSAHFPISDGMMERALHGSKFILPPKFQNHLTDMKLGIGDSASSLSHFSTLDRPSLQNDHFASLPSWSNDKNRSKFPDGSSAETLDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGSLDAHQKEDDQGSSKRGKLPVLLDGSPNDVRDNHANVGNGESTSSGLLSNPIRPDLLHSKGEEVGGSSTSKDKLPHWLREAVSSPAKLPDPELPPTVSAIAHSVRLLYGEDKPAIPPFVIPGPPPSLPKDPRCSVKKKKKRRSHKFNRGLQDFAGNGASSSIPLGPPFPLLSHTAALGTQQIESDLNLPPLNLKVANSSHSSKKASSGLSPSPEVLQLVASCVAPGSHLPSITGTSNFLDSKLPLPRPVGRAKFKDSEGVFRNKNSRQVSPKIWCPPQEQEVHDLDSGDSSKTQSDPSRVEQPDEVEVSSEGTVSDHAVRDQET 2331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0087 2331 SMART helicmild6 1100 1185 IPR001650 -
Aed8g0087 2331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 728 979 IPR027417 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1391 1407 - -
Aed8g0087 2331 CDD SF2_C_SNF 1069 1196 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2039 2057 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 520 538 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1391 1445 - -
Aed8g0087 2331 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 16 2325 - -
Aed8g0087 2331 ProSitePatterns Zinc finger PHD-type signature. 85 126 IPR019786 -
Aed8g0087 2331 CDD SANT_TRF 1819 1863 - -
Aed8g0087 2331 PANTHER PROTEIN CHROMATIN REMODELING 4 16 2325 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 33 59 - -
Aed8g0087 2331 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 767 944 IPR014001 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2238 2331 - -
Aed8g0087 2331 Pfam Helicase conserved C-terminal domain 1075 1185 IPR001650 -
Aed8g0087 2331 Gene3D - 989 1216 IPR027417 -
Aed8g0087 2331 SUPERFAMILY Chromo domain-like 654 701 IPR016197 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 498 538 - -
Aed8g0087 2331 CDD CD2_tandem 661 714 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2063 2079 - -
Aed8g0087 2331 CDD PHD2_CHD_II 85 126 - -
Aed8g0087 2331 SMART chromo_7 660 717 IPR000953 -
Aed8g0087 2331 SMART chromo_7 543 650 IPR000953 -
Aed8g0087 2331 SMART DUF1087_2 1350 1415 IPR009463 -
Aed8g0087 2331 Pfam SNF2-related domain 773 1048 IPR000330 GO:0005524|GO:0140658
Aed8g0087 2331 CDD CD1_tandem 591 646 - -
Aed8g0087 2331 Pfam PHD-finger 85 126 IPR019787 -
Aed8g0087 2331 SUPERFAMILY FYVE/PHD zinc finger 79 130 IPR011011 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1 63 - -
Aed8g0087 2331 Pfam Chromo (CHRromatin Organisation MOdifier) domain 663 714 IPR023780 -
Aed8g0087 2331 SMART ultradead3 751 955 IPR014001 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2127 2165 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1950 1981 - -
Aed8g0087 2331 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 128 IPR013083 -
Aed8g0087 2331 Gene3D - 1793 1892 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1414 1441 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2009 2079 - -
Aed8g0087 2331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 981 1235 IPR027417 -
Aed8g0087 2331 ProSiteProfiles Chromo and chromo shadow domain profile. 580 648 IPR000953 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1336 1374 - -
Aed8g0087 2331 Pfam CHD subfamily II, DUF1087 1365 1409 IPR009463 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 344 369 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 1357 1374 - -
Aed8g0087 2331 Gene3D - 664 714 - -
Aed8g0087 2331 Gene3D - 569 649 - -
Aed8g0087 2331 SMART PHD_3 84 127 IPR001965 -
Aed8g0087 2331 ProSiteProfiles Chromo and chromo shadow domain profile. 662 724 IPR000953 -
Aed8g0087 2331 Gene3D - 746 988 IPR038718 -
Aed8g0087 2331 SUPERFAMILY Chromo domain-like 608 650 IPR016197 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 299 379 - -
Aed8g0087 2331 ProSiteProfiles Zinc finger PHD-type profile. 82 129 IPR019787 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 299 324 - -
Aed8g0087 2331 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1074 1233 IPR001650 -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 200 270 - -
Aed8g0087 2331 MobiDBLite consensus disorder prediction 2305 2331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0087 Aed-Chr8 796259 814585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0087 735 1228 RAD5 or RAD16-like Gene Family AT1G02670 26.178 1.28e-35 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aed8g0087 SNF2_N 1.4e-58 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0087 - - gmx:100793933 4192.88