Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0076 ATGGCGCCGAGCACCGGAGACGTTCAACTAACTTCCCCCGGCGCCGGCGAAGATTCCGACGAGCTCGAAGACGTTCGCCTCCTCGACTTCTACGACAAAAACGACGTCGTCCACGATGAAACCAAAAGGATTCAGGTCAGAATCACCGGCATGACCTGCGCCGCGTGCTCCAACTCCGTCGAAACCGCTCTCAGGTCCGTTCACGGCGTCACCGAAGCCTCCGTCGCTCTCCTTCAAAACAAAGCCGACGTCGTTTTCATCCCCCGCCTCGTCAACGATGAGGACATTAAGAATGCGATTGAAGACTCAGGTTTCGAAGCCGAGATCTTGCCGGACTCCGGCACGGCGGCGCACGCCGCCGCCGCCGTGGTGGGACAGTTCACCATCGGCGGAATGACGTGTGCGGCGTGTGTGAATTCCGTGGAGGGAATTTTGAAGAAACTGAACGGAGTGAAGAGAGCGGTGGTGGCTTTGGCTACTTCGTTGGGCGAGGTAGAATATGATCCCAACGTGATAAGCAAAGAGGATATCGTGGCTGCGATTGAAGACGCGGGTTTCGAGGGCGCGTTTGTGCAGAGTAACGGGCAGGACCGGATTGTGTTAGGGGTTAGTGGCGTGTACACTACGGGGGATGCTCAGGTTTTGGAGGTGATGCTGAGTAGCACCAAAGGGATGAGGCAGTTTCGGTTTGATACGGAGTTGAACGAGGTTGATGTGGTGTTTGACCCTCAAGTTATCAGTTCGAGGTCGTTGGTTGATGGGATTGAGTTGGGAAGTAATGGCAAGTTTAAATTGCATGTTAGGAATCCTTACGCTAGGATGGCTTCTAAAGATGGTTCAGAAATCTCTACTATGTTTCGCCTTTTTACTTTCAGCTTGTTTCTTAGTATTCCTCTATTCTTTATGGGGGTGGTATGTCCTCATATACCGTTGGTCTACTCCTTGTTACTTTGGAGATGTGGGCCTTTTCTCATGGGTGATTGGCTGAATTGGGCGTTGGTGAGTGTCATTCAATTTGTGATTGGGAAACGCTTCTATATAGCAGCTGGAAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGGTTGCTTTGGGAACTACAGCCTCTTATGTTTATTCTGTTTGTGCTCTTCTATATGGTGCCCTTACAGGATTCTGGTCTCCAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAGTGCCTGGCCAAGGGAAAGACCTCTGATGCCATTAAGAAGCTAGTGGAACTTACTCCTGCAACTGCTTTATTGATTGTCAAAGATAAAGGTGGTAGAACTATTGAAGAAAGAGAGATAGATTCCTTACTCGTTCAACCTGGTGACACATTAAAAGTTCTTCCTGGTACAAAGATTCCTGCTGATAGTATTGTTACTTGGGGTTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCTATACCCGTTTCGAAGGAGGTCAATGCATCTGTTATTGGAGGTACAATCAATTTGCATGGTGTCCTTCACGTTCGAGCTACCAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATTAGTTTGGTGGAGACAGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAGTTGTTGTGTTGGCATTATTGACACTACTGTATATAGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCAAAAAATGGAAATCACTTTGTTTTTGCCCTTATGTTTTCAATATCTGTTGTGGTGATTGCATGTCCATGTGCACTTGGTTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGAGTTGGGGCCAACAATGGCGTGTTAATTAAAGGAGGAGACTCCTTGGAAAGGGCTCAGATGGTGAAGTACGTCATTTTTGATAAAACAGGCACTCTAACTCAGGGGAAAGCCACTGTTACTGCTGCTAAAGTATTCGCAGGAATGGATCGTGGTGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGGAAAAGCAATATTGCGATATGCACACCATTTTCATTTCTTTGATGAGTCTTCTCCTAAAAGTGGTACCAAGGATGCTGCTGAGGAGTTCAAGTCAGGAGGGTGGCTTTATGATGCTTCAGACTTCTCTGCTCTTCCAGGAAGGGGCATCCAGTGCGTTATAGATGGAAGGCGTATTTTGGTTGGTAACAGGAGGCTGATGGACGAAACTGGCATAAACATTTCTACAGAAGTGGAAAATTTTGTTGTAGAGATTGAAGAAAGTGCAATGACAGGGATACTAGTAGCATATGATGATATATTAATTGGAGTCTTAGGGGTTGCAGACCCATTAAAGAGAGAAGCTGCTATTGTTATAGAGGGCCTACAGAAAATGGGAGTCATACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCAAGCTGTTGCCAAGGAGGTTGGCATTAAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAGGATGGAAGTATAGTTGCAATGGTGGGTGATGGCATCAATGACTCTCCAGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGGGCTGGGACAGATGTTGCAATAGAAGCTGCTAACTATGTGCTGATGAGAGACAACTTGGAAGATGTGATCACAGCCATTGATCTTTCCAAGAAGACCTTTTTCCGTATTCGATTGAATTATGTATTTGCCATGGCTTACAATGTTGTTGCTATACCGGTTGCTGCTGGGGTTTTCTTTCCTTCGTTGGGGATCAAGTTGCCACCATGGGTTGCTGGTGCATGCATGGCCATGTCGTCTGTTAGTGTCGTATGCTCTTCTTTGCTTTTGAGAAGATATAGAAAACCCAAACTTACTGCAATACTTGAAATAGTTGTAAATTAA 2976 0.459 MAPSTGDVQLTSPGAGEDSDELEDVRLLDFYDKNDVVHDETKRIQVRITGMTCAACSNSVETALRSVHGVTEASVALLQNKADVVFIPRLVNDEDIKNAIEDSGFEAEILPDSGTAAHAAAAVVGQFTIGGMTCAACVNSVEGILKKLNGVKRAVVALATSLGEVEYDPNVISKEDIVAAIEDAGFEGAFVQSNGQDRIVLGVSGVYTTGDAQVLEVMLSSTKGMRQFRFDTELNEVDVVFDPQVISSRSLVDGIELGSNGKFKLHVRNPYARMASKDGSEISTMFRLFTFSLFLSIPLFFMGVVCPHIPLVYSLLLWRCGPFLMGDWLNWALVSVIQFVIGKRFYIAAGRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLIVKDKGGRTIEEREIDSLLVQPGDTLKVLPGTKIPADSIVTWGSSYVNESMVTGESIPVSKEVNASVIGGTINLHGVLHVRATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVVLALLTLLYIAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDSLERAQMVKYVIFDKTGTLTQGKATVTAAKVFAGMDRGEFLTLVASAEASSEHPLGKAILRYAHHFHFFDESSPKSGTKDAAEEFKSGGWLYDASDFSALPGRGIQCVIDGRRILVGNRRLMDETGINISTEVENFVVEIEESAMTGILVAYDDILIGVLGVADPLKREAAIVIEGLQKMGVIPVMVTGDNWRTAQAVAKEVGIKDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANYVLMRDNLEDVITAIDLSKKTFFRIRLNYVFAMAYNVVAIPVAAGVFFPSLGIKLPPWVAGACMAMSSVSVVCSSLLLRRYRKPKLTAILEIVVN 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0076 991 Gene3D - 125 190 - -
Aed8g0076 991 SFLD Haloacid Dehalogenase 626 916 - -
Aed8g0076 991 ProSiteProfiles Heavy-metal-associated domain profile. 43 109 IPR006121 GO:0046872
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 812 822 - -
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 790 801 - -
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 888 900 - -
Aed8g0076 991 PRINTS P-type cation-transporting ATPase superfamily signature 644 658 - -
Aed8g0076 991 PANTHER HEAVY METAL P-TYPE ATPASE 3 984 - -
Aed8g0076 991 Pfam E1-E2 ATPase 427 623 - -
Aed8g0076 991 Pfam haloacid dehalogenase-like hydrolase 640 879 - -
Aed8g0076 991 SUPERFAMILY HAD-like 643 971 IPR036412 -
Aed8g0076 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 646 652 IPR018303 -
Aed8g0076 991 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 360 974 IPR027256 GO:0006812|GO:0016021|GO:0019829
Aed8g0076 991 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Aed8g0076 991 SUPERFAMILY HMA, heavy metal-associated domain 126 194 IPR036163 GO:0046872
Aed8g0076 991 CDD P-type_ATPase_Cu-like 287 962 - -
Aed8g0076 991 Gene3D - 414 536 - -
Aed8g0076 991 SUPERFAMILY Calcium ATPase, transduction domain A 446 532 IPR008250 -
Aed8g0076 991 ProSiteProfiles Heavy-metal-associated domain profile. 198 256 IPR006121 GO:0046872
Aed8g0076 991 Gene3D - 41 112 - -
Aed8g0076 991 MobiDBLite consensus disorder prediction 1 20 - -
Aed8g0076 991 CDD HMA 45 108 IPR006121 GO:0046872
Aed8g0076 991 CDD HMA 126 187 IPR006121 GO:0046872
Aed8g0076 991 Gene3D - 611 922 IPR023214 -
Aed8g0076 991 SUPERFAMILY HMA, heavy metal-associated domain 38 112 IPR036163 GO:0046872
Aed8g0076 991 TIGRFAM TIGR00003: copper ion binding protein 126 187 IPR006122 GO:0005507
Aed8g0076 991 TIGRFAM TIGR00003: copper ion binding protein 44 107 IPR006122 GO:0005507
Aed8g0076 991 PRINTS H+-transporting ATPase (proton pump) signature 896 921 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g0076 991 PRINTS H+-transporting ATPase (proton pump) signature 865 881 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g0076 991 PRINTS H+-transporting ATPase (proton pump) signature 837 853 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g0076 991 PANTHER ATP7, ISOFORM B 3 984 - -
Aed8g0076 991 ProSitePatterns Heavy-metal-associated domain. 48 78 IPR017969 GO:0046872
Aed8g0076 991 ProSiteProfiles Heavy-metal-associated domain profile. 124 190 IPR006121 GO:0046872
Aed8g0076 991 SFLD p-type atpase 626 916 IPR044492 -
Aed8g0076 991 Pfam Heavy-metal-associated domain 46 106 IPR006121 GO:0046872
Aed8g0076 991 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Aed8g0076 991 Gene3D - 745 796 IPR023299 GO:0000166
Aed8g0076 991 Gene3D - 651 744 IPR023299 GO:0000166
Aed8g0076 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 380 953 IPR023298 -
Aed8g0076 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 738 949 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed8g0076 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 399 664 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0076 Aed-Chr8 703675 709093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0076 1 988 Primary Pumps ATPases AT5G44790 73.632 0.0 1465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0076 K17686 - gmx:100778219 1749.95