Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0058 ATGAGTACAGGAGACAGGCCAAAAATGCATGATCAAACTGGTTGCTTTGATCCCAACACAATGGGAGAAAGTGTACCCTCTCTAAAAGATAATAACTTTCCTCAAACTCTATCTCCATCACCTATGGTTGTAGGAAACACCTCAAACAGAAACAATAGCCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAACTCTCCTATAACCATCACAATCCACAACACCAAGAAGATGTTGTCTCCACCTATGCAAGTGGAGTAGTAACTGCTGCCACATCTATTGAAGTCCCTCATCCACAGCATCTAGCTTTGAACATGGGAAACTCCTACATCAACAACAACAACATGGATAACCATTTGGTGCAAGAGGTCATTGATGCCTTTCCCTATCAACAATCCACTTGGGACCCTACTACTGTTCAGGAATTACAAGACATGGCATATGCTAATCACGCAGAACAACAACAAAATGAACAACAATTTCAGCAAATTGAGACTCAAAACTGCAGCCAAAGCTACAACAACCCCTCTTCCATACTAGACCCTCCTTACCCTTCACAAGATCTCCTAAACCTTCTCCACCTGCCAAGATGCTCAGCCTCAATTAGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAATCCAATGCCCTTTCTTGGAGACATTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCAGCTGCCTCCACAGCCTCCAGCACTCAGAGAGCTGTTTCAGTCTCTTCCGCGCGGCTATAGCTTGCCAACAACAAACTCAAGGAATGGCTCAGTACTCTTTGGTGGAGGGGATGAGATGGAGGGTGGTGATGGCAGCCAGCTTGACATGGGAGTGCTGGAATTCAACAGGGTCACACCTTCTGTTTCCAAAGGAAGGGGTGCTGGCAAAGCTACCAAACATTTTGCAACTGAGAAACAAAGAAGAGAGCAACTCAATGGAAAATACAAAATCTTGAGGAATCTCATCCCAAGCCCCACCAAGCTGATTAGAACTGTCAATGAGCTCAAACTGCTAGTGGAGAAGAAAAGATATGCAAAGGAGAGGTGCAAGAGGCCCAAAACAGAAGAAGATGCTGCTGAGAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGAGGCATAAGAACCTCATGGCTCCAGAGGAAATCCAAAGACAGTGAGGTTGATGTTCGGATCATCGACGATGATGTCACAATCAAACTCTTCCAGAGGAAGAAGATCAACTGCCTGCTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGTTGGAGCTTCACCATGTTGCTGGTGGACATGTTGGAGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATGGAAGGTTCTTCAGTCTATGCAAGTGCCATAGCCAATAGGGTGATTGATGTTCTGGACAGTCAGTACACAGCAGCAGTTCCACACACAAACAGCTATTAG 1488 0.4476 MSTGDRPKMHDQTGCFDPNTMGESVPSLKDNNFPQTLSPSPMVVGNTSNRNNSLEENLRLSVEELSYNHHNPQHQEDVVSTYASGVVTAATSIEVPHPQHLALNMGNSYINNNNMDNHLVQEVIDAFPYQQSTWDPTTVQELQDMAYANHAEQQQNEQQFQQIETQNCSQSYNNPSSILDPPYPSQDLLNLLHLPRCSASISLTNPTQNTPNFQNPMPFLGDIPIGSDNTSASSVLYDPLFHLNQLPPQPPALRELFQSLPRGYSLPTTNSRNGSVLFGGGDEMEGGDGSQLDMGVLEFNRVTPSVSKGRGAGKATKHFATEKQRREQLNGKYKILRNLIPSPTKLIRTVNELKLLVEKKRYAKERCKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIMEGSSVYASAIANRVIDVLDSQYTAAVPHTNSY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0058 495 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 313 366 IPR011598 GO:0046983
Aed8g0058 495 PANTHER TRANSCRIPTION FACTOR BHLH91 9 494 - -
Aed8g0058 495 MobiDBLite consensus disorder prediction 305 324 - -
Aed8g0058 495 PANTHER TRANSCRIPTION FACTOR BHLH91 9 494 IPR045895 GO:0006355|GO:0048658
Aed8g0058 495 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 370 IPR036638 GO:0046983
Aed8g0058 495 MobiDBLite consensus disorder prediction 17 34 - -
Aed8g0058 495 MobiDBLite consensus disorder prediction 1 34 - -
Aed8g0058 495 Pfam Helix-loop-helix DNA-binding domain 316 344 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0058 Aed-Chr8 593781 595713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0058 85 493 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 38.106 2.61e-75 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed8g0058 HLH 2.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0058 - - gmx:100782512 796.578