Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0053 ATGAGATTAGTGGCACCTTACTCTATTGGGACATGCCTTCCTTCCCTTCAACCCCAAAAATGGAACAAATACTCAGCACCTCTTAGTTGCCACCGTCACGTGAAATGTGCAGTTCAACTACAAGTAGCAGCTGCAGCACCACCGAGTATAGCAGTGGCACCTGCACCTGATGAGACCCTGGTGAAGAGAAGAACTGCTATAGGCCTTCTTGCATTTGATGCTGTCCTTGCTTATTCTTCATTGCAAGCAGCACCAGCAGCTGCTGAAAATCCATGTGAATTTCAAGTGGCACCTTCTGGCCTTGCCTTCTGTGACAAACTTGTGGGACCAGGTCCTCAAGCACTCAAGGGACAGCTTATTAAGGCGCATTATGTGGGGAGATTGGAGAATGGGAAAGTTTTCGATAGCAGCTACAATCGTGGCAAGCCACTAACCTTTCGCGTCGGTGTTGGAGAGGTTATTAAAGGTTGGGATGAAGGCATTATAGGAGGTGAAGGAATTCCCCCCATGCTTGCAGGAGGGAAACGTACACTGAAGATTCCTCCAGAACTTGGATATGGCTCAAGAGGGGCTGGTTCATGTGTCATTCCTCCTGATTCGGTACTGTTGTTCGACGTGGAATTTGTTAGCAAAGCATGA 639 0.4804 MRLVAPYSIGTCLPSLQPQKWNKYSAPLSCHRHVKCAVQLQVAAAAPPSIAVAPAPDETLVKRRTAIGLLAFDAVLAYSSLQAAPAAAENPCEFQVAPSGLAFCDKLVGPGPQALKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGIIGGEGIPPMLAGGKRTLKIPPELGYGSRGAGSCVIPPDSVLLFDVEFVSKA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0053 212 PANTHER - 26 211 IPR044609 GO:0000413|GO:0003755|GO:0061077
Aed8g0053 212 SUPERFAMILY FKBP-like 93 210 - -
Aed8g0053 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 113 208 IPR001179 GO:0003755
Aed8g0053 212 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 26 211 - -
Aed8g0053 212 Gene3D - 89 212 IPR046357 GO:0003755
Aed8g0053 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 117 212 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0053 Aed-Chr8 558068 560859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0053 93 210 Calmodulin-binding Proteins AT5G48570 39.837 1.91e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0053 K01802 - gmx:100778390 311.997