Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0040 ATGGATAGATATTCTAAAATTAATAAATTCATTATATTTTTAATTTTCTTGATATTTCTCATCATACTTCCAACCCTAATCAATGCGGAGTGTACGTGCTGCGACGAAGAAAAGAGTGAAGAGCGAAATAAATCAAAAGCCTTAAAGTACAAAATTGCAGCTCTGGTGTCGATTCTAGTCGCCGGTGCAATCGGCGTGTGTATCCCATTTCTCGGAAAATTCATACCCGCCTTGAGTCCGGAGAAAGACATCTTCTTCGTCATCAAAGCCTTCGCGGCGGGCGTGATACTTGCAACCGGCTTCATCCACGTCCTTCCCGACGCGTTTGGGAACCTAACCTCACCGCGCTTGAAGGAGCATCCGTGGGGCGAGTTTCCGTTCACTGGATTTGTTGCCATGTGCACTGCCATGGGGACTCTCATGGTGGACACTTATGCCACTGCTTATTTTCAAAAGCAGCACGGTTCCAAGGGAGCGCAAGTTGAGACCAATGACGTGGAGAAGGAATGTTCTTCGGGGCATGAAGGACATATGCATCTTCATACACATGCAACACATGGTCATGCTCATGGCCATGTTCCCGCCTCTCATGATGAACAATCATCGGAGCTTCTTCGTCACAGGGTTATATCACAGGTGTTGGAATTAGGAATTATTGTTCATTCAGTTATTATTGGAATTTCTTTGGGAGCTTCAGAGAGCCCTAAAACAATTAAGCCACTGATAGCTGCATTGACTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGATGTTGTCGATTGCAACAATGGGGTTGTTCTTTGCTTTAACTACTCCTGTGGGAATTGGAATTGGCATAGCGATCACTAATGGTTACGATGAAGACAGTCCCACTGCACTTATTATAGAAGGAATCTTCAATGCAGCATCAGCAGGGATCTTAATCTATATGGCACTTGTAGATCTTCTTGCAGCTGATTTTATGAATCCAAGAATGCAGAAAAGTGCTAGTCTCCGACTATGGGCCAATGTCTCTCTTTTGCTTGGAGCTGGTTGTATGTCTCTTTTGGCTAAATGGGCTTGA 1080 0.4389 MDRYSKINKFIIFLIFLIFLIILPTLINAECTCCDEEKSEERNKSKALKYKIAALVSILVAGAIGVCIPFLGKFIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAFGNLTSPRLKEHPWGEFPFTGFVAMCTAMGTLMVDTYATAYFQKQHGSKGAQVETNDVEKECSSGHEGHMHLHTHATHGHAHGHVPASHDEQSSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIKPLIAALTFHQFFEGMGLGSCITQMLSIATMGLFFALTTPVGIGIGIAITNGYDEDSPTALIIEGIFNAASAGILIYMALVDLLAADFMNPRMQKSASLRLWANVSLLLGAGCMSLLAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0040 359 TIGRFAM zip: ZIP zinc/iron transport family 34 359 IPR004698 GO:0005385|GO:0016021|GO:0071577
Aed8g0040 359 PANTHER ZINC/IRON TRANSPORTER 19 359 - -
Aed8g0040 359 Pfam ZIP Zinc transporter 49 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed8g0040 359 PANTHER ZINC TRANSPORTER 1 19 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0040 Aed-Chr8 478119 481132 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0040 28 359 Inorganic Solute Cotransporters AT3G12750 56.560 2.18e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0040 K14709 - gmx:547695 523.472