Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0015 ATGGCTGAGCCTCTAAGGAATAAGCTGAAGACGCTTTGTGCTGTGCATGGCTGCTCTTACATCATTTTCTGGCGCATTCATCCTCAAAACTCCTTGATGTTGACCGTGGAAGATGTATATTATGAAGATCAATTGGGAGAAGAGATTGTCAACACGGTTCCACAGGTCCATTTGATTGGCGAAGGCATTGTTGGTCAAGCTGCTTTTACTGGAAAACACAGATGGGTGGACTCAGATGCTCAAATGAGTGAGGTATTAATTTTTACTGTTTATTGGTATCATTTCAACTTCTCATCTGTTTTTTGTTTTTTTGTCCACTTGAAAATTTATGGTTTTCATCAACAGTTCTCGTCTGGGATAGAGGTACCATCTAAACATTTTACACTGAACAACTATTCCAATTTGCAGACAATCGTGGTGATATCTTTTCTACCATGGGGAGTGATACAATTTGGATCCAAAAATAAGATTTTGGAGAGAGTGAAATTTGTGGAACAAATAGAAAGGTTGCTAAGGGGGATAGAAGATGAGGGTGTTCTTGATGTATTAAATAATACTTCTCTATCTCTAGATTGTGAAAATTACGATCTAAATGGATTGTTGGCTTCCGTTTCTTCTGAAAATTTCAATGATTGGAATCTCATATCCGTTCATGATAACAAGAACTCTGCCAGCGTTGATGATTCCTTCCCTTCACTGGATATGATTCTTGAAGAACATGGATTTTGCTCTCATCTTGGTGACCAATTGGCACCTGTCACTGATTACTCAATGAACAACTTTATTGCTAGAAATCCCAGTTTTGGCACATGTGGTGGCGAAATTTCCGCATTGGATATCCAACATTTTGGTCAAGTGACACAAGTCAATTATCCTGATAGTCTTAGTATGATGCATGAGCTCTCCAAGGACTTGTTGGATCCAGTTGATGCATTAGAAGAATTTTCAAAGCTCTTCTCCATGGATGATCTCTGCCAATTGTTAGCTCCTTCTCCAGATCATGACAATTGTGGAACAGTGACTGCTGCATTGGATGAGTCCCAAGAGTTTAATCCCTCATTTTTTGGTCTGGTTGATGATGATATTGTTCCACTCACATCTACAGTTATGCATAGTTCTGAAAGCATGGTACATGATATGAATCAATTATCAAACAATAGAAATCCAAAGCACCTGGCAAGTCATGCTGTTCCTAAATTGGACATGTCAAGCAATCTTGCACACAATAAGGTCACCAGGAAGAAGGCTAGGCCGGGCGAATCAACTCGACCGAGACCGAAGGATCGTCAGCAGATTCAAGACCGGATTGGAGAGTTGAGAGGGATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGAACCATCAGATACATGATATTCTTACAAAGCATCACCAAGTATGCAGACAAGCTACAAGAACATAGTGAGCCTAAGCTCATTGAGCAGGAAAAGGGAAAGGTTCTAAAAGATGGTGGTGGTGTTACATGTGCATTTGAAGTGGAAGGTCAAACAATGGCATGCCCAATTATAGGTTCCTTTCTAGAGATAGTAGACAACATTGGGGGGTTTGGGCTGAATATCTTGAAGGGAAAGATGGAAATCAAGGAGAATAAAATATGGGCACGCTTTATTGTAGAGGCGAACAGAAAAGTGACGAGAATAGACGTATTTTGGTCACTCATTCATCTTCTACAGCAGAAAAATACATTAATTTGGAACGGATTCACCTAA 1743 0.3999 MAEPLRNKLKTLCAVHGCSYIIFWRIHPQNSLMLTVEDVYYEDQLGEEIVNTVPQVHLIGEGIVGQAAFTGKHRWVDSDAQMSEVLIFTVYWYHFNFSSVFCFFVHLKIYGFHQQFSSGIEVPSKHFTLNNYSNLQTIVVISFLPWGVIQFGSKNKILERVKFVEQIERLLRGIEDEGVLDVLNNTSLSLDCENYDLNGLLASVSSENFNDWNLISVHDNKNSASVDDSFPSLDMILEEHGFCSHLGDQLAPVTDYSMNNFIARNPSFGTCGGEISALDIQHFGQVTQVNYPDSLSMMHELSKDLLDPVDALEEFSKLFSMDDLCQLLAPSPDHDNCGTVTAALDESQEFNPSFFGLVDDDIVPLTSTVMHSSESMVHDMNQLSNNRNPKHLASHAVPKLDMSSNLAHNKVTRKKARPGESTRPRPKDRQQIQDRIGELRGIIPNGGKCSIDSLLDRTIRYMIFLQSITKYADKLQEHSEPKLIEQEKGKVLKDGGGVTCAFEVEGQTMACPIIGSFLEIVDNIGGFGLNILKGKMEIKENKIWARFIVEANRKVTRIDVFWSLIHLLQQKNTLIWNGFT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0015 580 MobiDBLite consensus disorder prediction 397 431 - -
Aed8g0015 580 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 429 471 IPR036638 GO:0046983
Aed8g0015 580 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 369 573 IPR043561 GO:0003700|GO:0006355
Aed8g0015 580 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 394 IPR043561 GO:0003700|GO:0006355
Aed8g0015 580 MobiDBLite consensus disorder prediction 413 431 - -
Aed8g0015 580 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 416 465 IPR011598 GO:0046983
Aed8g0015 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 369 573 - -
Aed8g0015 580 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 1 394 - -
Aed8g0015 580 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 170 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0015 Aed-Chr8 205976 209594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0015 392 570 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 46.465 5.17e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0015 - - aprc:113857884 438.728