Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed7g2533 | ATGGTGCTTTGGAATCATACAAATAAACCGCAACGCGTTTCATCATCGATTCACCCAAATTCAACGAAACACCATCCCCACCTCAATGGTGTATGTATAATGGAGCTTGATTTGAATCAGGAGCCTTCGGATCCAACTCATGCTTCTCCAGATGAATTTGATTCTTTGTTGGAAGAACTAGAATCTGCCCATGAACACGTGCAGGACCGTATTAGGCGCCTTGAAGCGATAACATCGAGAACCAGGCAGTATCAGAGGTGGCCACTGTTTCACACTCCAATCCAAATAACCAACTTTACAGGACAAACCAGCACACCAGCTGATGCTCGCGAAGAAGGAATGCAGAGCCGGGAAGTTGAGGAAAGATTCGTTGAAAGTGGGAGAGGGTGCAAAAGGAAAGGTGCCCATTTAATAGCTAAGCCATTGGGGAGGATTGAAACAGATGCTAGTAAGGAAGGGGGAAGCACTGGAAATTTCTATGACTGCAATATATGCCTTGACAGGGCAAGAGATCCTGTGTTGACCTGCTGTGGTCACTTGTTTTGTTGGTCATGCTTCTATCAGGTAGAAATTGTCTCTTCAAATGTGAGGGAGTGCTCCGTTTGTAAAGGAGAGGTTACCGAAACTGGCATTATTCCGATTTATGGCAACTCTAGTGCTGATGCCAGTTGTGAGTCAGGATTAAAAGGAGCTGGTTTGAGAATTCCTCCTCGACCCGCTGCACCCAGAATTGAGAGTTTTAGGCAGCAGCTAATAAGCCAGGGAGCATCTTCTTCTGTAATCCAAAATATCCGGCGCTTTCATCACCTTATTGGCGGGTTTGGATCGCGAGGTCAGTCACAAAGCCCCAATGCTGTAACTGATAGAAATAATGGTTTGCTCATTCAGTCTCGCCTGCAGACAGGCAATGATCGCAGTACTGGTTCCTCTCCGACTCCGATTTCAACCTTGTTAGTGCAAGGAGCTGCTTCTTTTTCATCCCTTTCATCAGCATTAAATTCTGCGATGGATTCTGCTGAGAGATTAGTTGAGGACCTTGAGTCATATATTCACAATTCAAGCCATAATGGGAATGTTGCTGCAACTGATTCCACACCTGCAGTTTCTACATCTCCTTTTAGTAGGAATGTTGATACCACTGCTGATGTTGGCTCAGAAATTCAGACAACAGATAGTAACATACAGACTGAGACTAGTCCATTGGACCCTTCTTCATCTCAAAGAGGAAGCACTCGTGTTTCAACTTCAAGACAAGTTTCAAATGATCGCAGAAGGAGGAGGTCAAGATGA | 1290 | 0.4496 | MVLWNHTNKPQRVSSSIHPNSTKHHPHLNGVCIMELDLNQEPSDPTHASPDEFDSLLEELESAHEHVQDRIRRLEAITSRTRQYQRWPLFHTPIQITNFTGQTSTPADAREEGMQSREVEERFVESGRGCKRKGAHLIAKPLGRIETDASKEGGSTGNFYDCNICLDRARDPVLTCCGHLFCWSCFYQVEIVSSNVRECSVCKGEVTETGIIPIYGNSSADASCESGLKGAGLRIPPRPAAPRIESFRQQLISQGASSSVIQNIRRFHHLIGGFGSRGQSQSPNAVTDRNNGLLIQSRLQTGNDRSTGSSPTPISTLLVQGAASFSSLSSALNSAMDSAERLVEDLESYIHNSSHNGNVAATDSTPAVSTSPFSRNVDTTADVGSEIQTTDSNIQTETSPLDPSSSQRGSTRVSTSRQVSNDRRRRRSR | 429 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed7g2533 | 429 | Coils | Coil | 57 | 77 | - | - | |
Aed7g2533 | 429 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 38 | 407 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Aed7g2533 | 429 | Pfam | zinc-RING finger domain | 162 | 203 | IPR001841 | - | |
Aed7g2533 | 429 | CDD | RING-HC_AtRMA_like | 160 | 204 | - | - | |
Aed7g2533 | 429 | MobiDBLite | consensus disorder prediction | 354 | 429 | - | - | |
Aed7g2533 | 429 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Aed7g2533 | 429 | MobiDBLite | consensus disorder prediction | 354 | 417 | - | - | |
Aed7g2533 | 429 | ProSiteProfiles | Zinc finger RING-type profile. | 162 | 203 | IPR001841 | - | |
Aed7g2533 | 429 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 145 | 216 | IPR013083 | - | |
Aed7g2533 | 429 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 38 | 407 | - | - | |
Aed7g2533 | 429 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Aed7g2533 | 429 | SMART | ring_2 | 162 | 202 | IPR001841 | - | |
Aed7g2533 | 429 | SUPERFAMILY | RING/U-box | 158 | 211 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed7g2533 | Aed-Chr7 | 26988671 | 26990731 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed7g2533 | 113 | 301 | C3H Transcription Factor Family | AT3G58030 | 38.776 | 3.31e-33 | 127 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed7g2533 | K10666 | - | gmx:100794016 | 623.624 |